LOCUS AK290965 1506 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75006 complete cds, highly similar to Homo
sapiens CD177 molecule, mRNA.
ACCESSION AK290965
VERSION AK290965.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1506)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1506
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2RI2002151"
/clone_lib="NT2RI2"
/db_xref="H-InvDB:HIT000423762"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuronal precursor cells treated
2-weeks mitotic inhibitor after 5-weeks retinoic acid
(RA) induction."
/note="majorly NT2 neuron"
/organism="Homo sapiens"
CDS 32..1345
/codon_start=1
/note="highly similar to Homo sapiens CD177 molecule,
mRNA"
/protein_id="BAF83654.1"
/transl_table=1
/translation="MSAVLLLALLGFILPLPGVQALLCQFGTVQHVWKVSDLPRQWTP
KNTSCDSGLGCQDTLMLIESGPQVSLVLSKGCTEAKDQEPRVTEHRMGPGLSLISYTF
VCRQEDFCNNLVNSLPLWAPQPPADPGSLRCPVCLSMEGCLEGTTEEICPKGTTHCYD
GLLRLRGGGIFSNLRVQGCMPQPGCNLLNGTQEIGPVGMTENCNKKDFLTCHRGTTIM
THGNLAQEPTDWTTSNTEMCEVGQVCQETLLLLDVGLTSTLVGTKGCSTVGAQNSQKT
TSHSAPPGVLVASYTHFCSSDLCNSASSSSVLLNSLPPQAAPVPGDRQCPTCVQPLGT
CSSGSPRMTCPRGTTHCYDGYIHLSGGGLSTKMSIQGCVAQPSSFLLNHTRQIGIFSA
REKRDVQPPASQHEGGGAEGLESLTWGVGLALAPALWWGVVCPSC"
BASE COUNT 318 a 470 c 403 g 315 t
ORIGIN
1 gcagaaagag attaccagcc acagacgggt catgagcgcg gtattactgc tggccctcct
61 ggggttcatc ctcccactgc caggagtgca ggcgctgctc tgccagtttg ggacagttca
121 gcatgtgtgg aaggtgtccg acctgccccg gcaatggacc cctaagaaca ccagctgcga
181 cagcggcttg gggtgccagg acacgttgat gctcattgag agcggacccc aagtgagcct
241 ggtgctctcc aagggctgca cggaggccaa ggaccaggag ccccgcgtca ctgagcaccg
301 gatgggcccc ggcctctccc tgatctccta caccttcgtg tgccgccagg aggacttctg
361 caacaacctc gttaactccc tcccgctttg ggccccacag cccccagcag acccaggatc
421 cttgaggtgc ccagtctgct tgtctatgga aggctgtctg gaggggacaa cagaagagat
481 ctgccccaag gggaccacac actgttatga tggcctcctc aggctcaggg gaggaggcat
541 cttctccaat ctgagagtcc agggatgcat gccccagcca ggttgcaacc tgctcaatgg
601 gacacaggaa attgggcccg tgggtatgac tgagaactgc aataagaaag attttctgac
661 ctgtcatcgg gggaccacta ttatgacaca cggaaacttg gctcaagaac ccactgattg
721 gaccacatcg aataccgaga tgtgcgaggt ggggcaggtg tgtcaggaga cgctgctgct
781 cctagatgta ggactcacat caaccctggt ggggacaaaa ggctgcagca ctgttggggc
841 tcaaaattcc cagaagacca ccagccactc agcccctcct ggggtgcttg tggcctccta
901 tacccacttc tgctcctcgg acctgtgcaa tagtgccagc agcagcagcg ttctgctgaa
961 ctccctccct cctcaagctg cccctgtccc aggagaccgg cagtgtccta cctgtgtgca
1021 gccccttgga acctgttcaa gtggctcccc ccgaatgacc tgccccaggg gcaccactca
1081 ttgttatgat gggtacattc atctctcagg aggtgggctg tccaccaaaa tgagcattca
1141 gggctgcgtg gcccaacctt ccagcttctt gttgaaccac accagacaaa tcgggatctt
1201 ctctgcgcgt gagaagcgtg atgtgcagcc tcctgcctct cagcatgagg gaggtggggc
1261 tgagggcctg gagtctctca cttggggggt ggggctggca ctggccccag cgctgtggtg
1321 gggagtggtt tgcccttcct gctaactcta ttacccccac gattcttcac cgctgctgac
1381 cacccacact caacctccct ctgacctcat aacctaatgg ccttggacac cagattcttt
1441 cccattctgt ccatgaatca tcttccccac acacaatcat tcatatctac tcacctaaca
1501 gcaaca
//