LOCUS AK290956 1463 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77661 complete cds, highly similar to Homo
sapiens microtubule-associated protein 1 light chain 3
beta(MAP1LC3B), mRNA.
ACCESSION AK290956
VERSION AK290956.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1463)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1463
/cell_line="NT2"
/cell_type="teratocarcinoma"
/clone="NT2NE2014884"
/clone_lib="NT2NE2"
/db_xref="H-InvDB:HIT000423753"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from NT2 neuron after the differentiation of
NT2 neuronal precursor cells."
/organism="Homo sapiens"
CDS 116..493
/codon_start=1
/note="highly similar to Homo sapiens
microtubule-associated protein 1 light chain 3
beta(MAP1LC3B), mRNA"
/protein_id="BAF83645.1"
/transl_table=1
/translation="MPSEKTFKQRRTFEQRVEDVRLIREQHPTKIPVIIERYKGEKQL
PVLDKTKFLVPDHVNMSELIKIIRRRLQLNANQAFFLLVNGHSMVSVSTPISEVYESE
KDEDGFLYMVYASQETFGMKLSV"
BASE COUNT 429 a 331 c 321 g 382 t
ORIGIN
1 atacaaggga agtggctatc gccagagtcg gattcgccgc cgcagcagcc gccgcccccg
61 ggagccgccg ggaccctcgc gtcgtcgccg ccgccgccgc ccagatcccc gcaccatgcc
121 gtcggagaag accttcaagc agcgccgcac cttcgaacaa agagtagaag atgtccgact
181 tattcgagag cagcatccaa ccaaaatccc ggtgataata gaacgataca agggtgagaa
241 gcagcttcct gttctggata aaacaaagtt ccttgtacct gaccatgtca acatgagtga
301 gctcatcaag ataattagaa ggcgcttaca gctcaatgct aatcaggcct tcttcctgtt
361 ggtgaacgga cacagcatgg tcagcgtctc cacaccaatc tcagaggtgt atgagagtga
421 gaaagatgaa gatggattcc tgtacatggt ctatgcctcc caggagacgt tcgggatgaa
481 attgtcagtg taaaaccaga aaaaatgcat ctcttctaga attgtttaaa cccttaccaa
541 ggaaaaaaaa aggggtgtta ccaactgaga tcgatcagtt catccaatca cagatcatga
601 aacagtagtg ttcccaccta ggagtgttag gaagttgtgt ttgtgtttca agcagaaaaa
661 ctgagctcca agtgagcaca ttcagctttg gaaactatat tatttaatgt aggctagctt
721 gttttcaaat tttaaaagtt taaaaataaa atactttgca ttctaagttg ccaataaaat
781 agaccttcaa gttattttaa tgctcttttc tcactaatag gaacttgtaa ttccagcagt
841 aatttaaagg ctttcagaga gaccctgagt cttctcttca ggttcacaga acccgccgcc
901 tttttgggta gaagttttct actcagctag agagatctcc ctaagaggat ctttaggcct
961 gagttgtgaa gcgcaacccc cgcaaaacgc atttgccatc acagttggca caaacgcagg
1021 gtaaacgggc tgtgtgagaa aacggccctg actgtaaact gctgaaggtc cctgactcct
1081 aagagaacca cacccaaagt cctcactctt gcaggggtag acatttctgg tttggtttgt
1141 tctctagata gttacacaca taaagacacc actcaaaagg aaacttgaat aatttataat
1201 tttgatcgag tttcttaaaa gaccctggag aaagagtggc atttcttctg tttcaggttt
1261 tgtctgagtt caaactagtg cctgtgttgt tacggaaagc agcagtgtac cagtgtcact
1321 ctggagtaca gcgggagaaa cacaaaatag tataactgaa aacattaaca ttcagacaca
1381 ctcccttctg ccttccggct taaagctgtg gatgatccac gtttttgttt ttttaatgtt
1441 aaatgtgtaa ctcagtatta ctg
//