LOCUS AK290891 1806 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77418 complete cds, highly similar to Homo
sapiens nuclear respiratory factor-1 (NRF-1) mRNA.
ACCESSION AK290891
VERSION AK290891.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1806)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1806
/cell_type="normal mesangial cells (NHMC56046-2)"
/clone="MESAN2017321"
/clone_lib="MESAN2"
/db_xref="H-InvDB:HIT000423688"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, normal mesangial cells"
/organism="Homo sapiens"
CDS 49..1560
/codon_start=1
/note="highly similar to Homo sapiens nuclear respiratory
factor-1 (NRF-1) mRNA"
/protein_id="BAF83580.1"
/transl_table=1
/translation="MEEHGVTQTEHMATIEAHAVAQQVQQVHVATYTEHSMLSADEDS
PSSPEDTSYDDSDILNSTAADEVTAHLAAAGPVGMAAAAAVATGKKRKRPHVFESNPS
IRKRQQTRLLRKLRATLDEYTTRVGQQAIVLCISPSKPNPVFKVFGAAPLENVVRKYK
SMILEDLESALAEHAPAPQEVNSELPPLTIDGIPVSVDKMTQAQLRAFIPEMLKYSTG
RGKPGWGKESCKPIWWPEDIPWANVRSDVRTEEQKQRVSWTQALRTIVKNCYKQHGRE
DLLYAFEDQQTQTQATATHSIAHLVPSQTVVQTFSNPDGTVSLIQVGTGATVATLADA
SELPTTVTVAQVNYSAVADGEVEQNWATLQGGEMTIQTTQASEATQAVASLAEAAVAA
SQEMQQGATVAMALNSEAAAHAVATLAEATLQGGGQIVLSGETAAAVGALTGVQDANG
LVQIPVSMYQTVVTSLAQGNGPVQVAMAPVTTRISDSAVTMDGQAVEVVTLEQ"
BASE COUNT 475 a 456 c 476 g 399 t
ORIGIN
1 agtctccacg gcgcaggccc acggtagcgc agccgctctg agaacttcat ggaggaacac
61 ggagtgaccc aaaccgaaca tatggctacc atagaagcac atgcagtggc ccagcaagtg
121 cagcaggtcc atgtggctac ttacaccgag catagtatgc tgagtgctga tgaagactcg
181 ccttcttctc ccgaggacac ctcttacgat gactcagata tactcaactc cacagcagct
241 gatgaggtga cagctcatct ggcagctgca ggtcctgtgg gaatggccgc tgctgctgct
301 gtggcaacag gaaagaaacg gaaacggcct catgtatttg agtctaatcc atctatccgg
361 aagaggcaac aaacacgttt gcttcggaaa cttcgagcca cgttagatga atatactact
421 cgtgtgggac agcaagctat tgtcctctgt atctcaccct ccaaacctaa ccctgtcttt
481 aaagtgtttg gtgcagcacc tttggagaat gtggtgcgta agtacaagag catgatcctg
541 gaagacctgg agtctgctct ggcagaacac gcccctgcgc cacaggaggt taactcagaa
601 ctgccgcctc tcaccatcga cggaattcca gtctctgtgg acaaaatgac ccaggcccag
661 cttcgggcat ttatcccaga gatgctcaag tactctacag gtcggggaaa accaggctgg
721 gggaaagaaa gctgcaagcc catctggtgg cctgaagata tcccctgggc aaatgtccgg
781 agtgatgtcc gcacagaaga gcaaaagcag agggtttcat ggacccaggc actacggacc
841 atagttaaaa actgttataa acagcatggg cgggaagacc ttttgtatgc ctttgaagat
901 cagcaaacgc aaacacaggc cacagccaca catagtatag ctcatcttgt accatcacag
961 actgtagtcc agacttttag taaccctgat ggcactgtct cacttatcca ggttggtacg
1021 ggggcaacag tagccacatt ggctgatgct tcagaattgc caaccacggt caccgttgcc
1081 caagtgaatt attctgccgt ggctgatgga gaggtggaac aaaattgggc cacgttacag
1141 ggaggtgaga tgaccatcca gacgacgcaa gcatcagagg ccacccaggc ggtggcatcg
1201 ttggcagagg ccgcagtggc agcttctcag gagatgcagc agggagctac agtcgctatg
1261 gcgcttaaca gcgaagctgc cgcccatgct gtcgccaccc tggctgaggc caccttacaa
1321 ggtgggggac agatcgtctt gtctggggaa accgcagcag ccgtcggagc acttactgga
1381 gtccaagatg ctaatggcct ggtccagatc cctgtgagca tgtaccagac tgtggtgacc
1441 agcctcgccc agggcaacgg accagtgcag gtggccatgg cccctgtgac caccaggata
1501 tcagacagcg cagtcaccat ggacggccaa gctgtggagg tggtgacatt ggaacagtga
1561 catacagcca tattatggca tcgttttcta gtctacttca aaatttttta cacgtttgca
1621 gaggtgcaat caaatggaat taagtctctc gactttggaa ggaaagtttt gttaaccttt
1681 ttttttttaa aaggaagaaa gcggattttg gaattgcatt ttttaaagca ccactcttga
1741 ttttctggga ttggtgaaga aactgcattg tcaatttcac tgtcccaaaa aagccaaatt
1801 gtggca
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