LOCUS AK290864 1568 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75926 complete cds, highly similar to Homo
sapiens exosome component 3 (EXOSC3), transcript variant 1, mRNA.
ACCESSION AK290864
VERSION AK290864.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1568)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1568
/cell_type="normal mesangial cells (NHMC56046-2)"
/clone="MESAN2000419"
/clone_lib="MESAN2"
/db_xref="H-InvDB:HIT000423661"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, normal mesangial cells"
/organism="Homo sapiens"
CDS 14..841
/codon_start=1
/note="highly similar to Homo sapiens exosome component 3
(EXOSC3), transcript variant 1, mRNA"
/protein_id="BAF83553.1"
/transl_table=1
/translation="MAEPASVAAESLAGSRARAARTVLGQVVLPGEELLLPEQEDAEG
PGGAVERPLSLNARACSRVRVVCGPGLRRCGDRLLVTKCGRLRHKEPGSGSGGGVYWV
DSQQKRYVPVKGDHVIGIVTAKSGDIFKVDVGGSEPASLSYLSFEGATKRNRPNVQVG
DLIYGQFVVANKDMEPEMVCIDSCGRANGMGVIGQDGLLFKVTLGLIRKLLAPDCEII
QEVGKLYPLEIVFGMNGRIWVKAKTIQQTLILANILEACEHMTSDQRKQIFSRLAES"
BASE COUNT 446 a 290 c 385 g 447 t
ORIGIN
1 ggtggagccc gcgatggccg aacctgcgtc tgtcgcggct gaatctctcg cgggcagcag
61 ggcgcgcgct gcacgcacag tactaggtca ggtggtgctc ccgggtgagg agctgctcct
121 gccggaacag gaggacgcgg aaggccctgg gggtgcagtg gagcgaccgt tgagcctgaa
181 tgctagagcg tgctcgcggg tgcgcgttgt atgcggtccg ggccttcggc gctgtgggga
241 ccgcctgctg gtcaccaagt gcggccgcct ccgtcacaag gagcccggca gtggcagcgg
301 cggcggtgtt tactgggtgg actctcagca gaagcggtat gttccagtaa aaggagacca
361 tgtgattggc atagtgacag ctaaatctgg agatatattc aaagttgatg ttggagggag
421 tgagccagct tctttgtctt acttgtcatt tgaaggtgca actaaaagaa acagaccaaa
481 tgtgcaggtt ggagatctca tctatggcca gtttgtggtt gctaataaag acatggaacc
541 agagatggtc tgtattgaca gctgtggacg agccaatgga atgggtgtca ttggacagga
601 tggtctgctt tttaaagtga ctctgggctt aattagaaag ctattagctc cagattgtga
661 aatcatacag gaagtgggaa aactctatcc actggagata gtatttggaa tgaatggaag
721 aatatgggtt aaggcaaaaa ccatccagca gactttaatt ttggcaaaca ttttagaagc
781 ttgtgaacac atgacgtcag atcaaagaaa acagatcttc tccagattgg cagaaagttg
841 atataggtgg acttttttac aggtcagttg aggcaaaaaa ctatgggttt tttcaggtga
901 acctccccca tttaaatact cagaagataa ggtgcgaatg tatgtattat tagagtccga
961 aagtattttt ataagttact ggttttcacc cacgcttttg tgggagagaa aatcattgca
1021 aaatcatttt ttttgttcgg tacaataaag tttactaaaa aacagtatta gggtttattt
1081 ggagttaact cccttagtaa ttgctacagc ttccataatt aactggaggt cagcagtaaa
1141 ataattttgt gattataaca gtaagccagg ttcaccagag gaaatgtgga atacctaagt
1201 ataaagcagc aaagaaatgt cacctgtagt cccattattc agcgggtgag tatataacaa
1261 cgaaatactt tttcatttac caagtattgt gttttgcatg gattaactcc tttattctaa
1321 ctgcagaaga cacttatcct cataattgaa actgaggcac agaatttaac ttggcctaca
1381 ttctctatat tcatcaaatt gaaattatag ttattatagc ttatatgcca ctttgtaata
1441 tacttttgtc tacttcaaac agcatgatac atttcacaac tttagtcaca tatttcatgt
1501 tacaggatat ttttgagttt tatcattata taaataacac tatgaggatt tctgaatcca
1561 aatctggc
//