LOCUS AK290836 2642 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78438 complete cds, highly similar to Homo
sapiens cleavage stimulation factor, 3' pre-RNA, subunit 3,77kDa
(CSTF3), mRNA.
ACCESSION AK290836
VERSION AK290836.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2642)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2642
/clone="LIVER2005363"
/clone_lib="LIVER2"
/db_xref="H-InvDB:HIT000423633"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="liver"
CDS 167..2320
/codon_start=1
/note="highly similar to Homo sapiens cleavage
stimulation factor, 3' pre-RNA, subunit 3,77kDa (CSTF3),
mRNA"
/protein_id="BAF83525.1"
/transl_table=1
/translation="MSGDGATEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQN
QPIDKARKTYERLVAQFPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWK
CYLSYVRETKGKLPSYKEKMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYA
ENQRITAVRRVYQRGCVNPMINIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARR
VAKEYETVMKGLDRNAPSVPPQNTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRV
MFAYEQCLLVLGHHPDIWYEAAQYLEQSSKLLAEKGDMNNAKLFSDEAANIYERAIST
LLKKNMLLYFAYADYEESRMKYEKVHSIYNRLLAIEDIDPTLVYIQYMKFARRAEGIK
SGRMIFKKAREDTRTRHHVYVTAALMEYYCSKDKSVAFKIFELGLKKYGDIPEYVLAY
IDYLSHLNEDNNTRVLFERVLTSGSLPPEKSGEIWARFLAFESNIGDLASILKVEKRR
FTAFKEEYEGKETALLVDRYKFMDLYPCSASELKALGYKDVSRAKLAAIIPDPVVAPS
IVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPPGLHPVPGGVFPVPPAAVVLMKLLP
PPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIITGGAPELAVEGNGPVESNAVLTK
AVKRPNEDSDEDEEKGAVVPPVHDIYRARQQKRIR"
BASE COUNT 825 a 485 c 610 g 722 t
ORIGIN
1 gcagccattt taattcatat ctgagtgggc ggtggcgatt ggtgttggcg gtctggctca
61 gctgggcagg gggtaacttt actgatttgg gggtggtttt tagtttaatt tttcttttct
121 agcttcccat cgacggtcag tgcgcacgtt gtaatcagct gaggccatgt caggagacgg
181 agccacggag caggcagctg agtatgtccc agagaaggtg aagaaagcgg aaaagaaatt
241 agaagagaat ccatatgacc ttgatgcttg gagcattctc attcgagagg cacagaatca
301 acctatagac aaagcacgga agacttatga acgccttgtt gcccagttcc ccagttctgg
361 cagattctgg aaactgtaca ttgaagcaga gattaaagct aaaaattatg ataaggttga
421 aaagctattt cagagatgcc ttatgaaggt tttgcacatt gatttatgga agtgttatct
481 ttcatatgtc cgagaaacca agggtaaact accaagttac aaagaaaaaa tggctcaagc
541 atatgacttt gcactggata aaattggaat ggaaattatg tcctatcaga tttgggtgga
601 ttacatcaat ttcctaaaag gcgtggaagc tgtaggatct tatgcagaaa atcaaagaat
661 aacagctgtc cgaagagttt atcaacgagg ttgtgttaat ccgatgatca acattgaaca
721 gctctggaga gactataaca agtatgaaga gggtatcaat attcatttag ctaaaaaaat
781 gattgaagat cggagtagag attatatgaa tgctagacgt gtagcaaagg aatatgagac
841 agtaatgaaa ggcttggacc gtaatgctcc ctcggtgcct cctcagaata ctcctcaaga
901 agctcaacaa gtagatatgt ggaagaaata tatacagtgg gaaaagagca accctcttcg
961 tacagaggat cagaccctta taacaaaaag agttatgttt gcttatgaac agtgcctgct
1021 tgtgctgggc catcaccctg atatttggta tgaagctgcc cagtatcttg agcagtcaag
1081 taaactgctc gcagaaaagg gagatatgaa taatgccaaa ttatttagtg atgaagctgc
1141 taatatatat gaaagagcca taagcacttt attgaagaag aatatgcttc tttattttgc
1201 atatgcagat tatgaagaga gtcgcatgaa gtatgaaaag gttcacagta tatataacag
1261 acttctggca attgaggata ttgaccctac cttggtatat atccaatata tgaaatttgc
1321 acggagagca gaaggcatca aatctggaag aatgatattt aaaaaagcaa gagaagatac
1381 cagaacccgc caccatgtct atgttactgc agcactcatg gaatattact gtagtaagga
1441 caaatctgtt gcctttaaga tttttgagct ggggctaaaa aaatatggag acattccaga
1501 gtatgtcctg gcctatattg actatctttc tcacctcaat gaggacaata atacccgagt
1561 tttgtttgaa cgagttttaa catctggaag ccttcctcct gagaagtctg gagaaatctg
1621 ggcccgattt ctagcatttg aaagtaatat tggtgatcta gctagtatac tcaaagtgga
1681 gaaaagacgg tttacagcat tcaaagaaga gtatgaaggg aaagaaacgg ctttactagt
1741 agatagatac aagttcatgg atttatatcc ttgctctgca agtgaattaa aagcacttgg
1801 ttataaggat gtctcccgtg ctaagctagc agctataatt ccggacccag ttgtagctcc
1861 ttctatagtg cctgttctga aagatgaagt ggatagaaaa ccagaatacc ctaaaccaga
1921 cactcagcag atgattccat ttcagccacg acatttagca cctccaggtt tacaccctgt
1981 acctggtgga gtgttcccag tccctcctgc agctgttgtt ttaatgaaac ttctccctcc
2041 tcctatctgt ttccagggtc cttttgtaca agtggatgaa ctgatggaaa ttttccgaag
2101 atgcaagata ccaaatactg ttgaggaagc tgtgaggatc attactggtg gggccccaga
2161 gctagctgta gaaggcaacg gccccgtgga aagtaatgca gtactcacca aggccgtcaa
2221 aaggcccaac gaggattcag atgaagatga agaaaaggga gccgttgtcc cccctgttca
2281 tgacatttac agagcacggc agcagaagcg gattcggtag ggttttaaac gcctctgcag
2341 aaaactcctg tccaggattc cttttgcctc aagtggtatg tttaaaagag acaacgcttt
2401 gttacaaggt tcttggaaac aaagttgtat tgtcattggt gcctctatca catggttctt
2461 gagaaaaaac aaaccaacct gtgtgaattt tagaatacgg aacagaccta tgctctaagc
2521 aaaattaggt tttcaaaaat gtgagaacag tacaaagtgg cagaaccaca ttttgttccc
2581 tcttcaaggg tgtcttgtat gtgccgcttg aagatttgtg agtttttcaa cagttttatt
2641 tt
//