LOCUS AK290770 2057 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76143 complete cds, highly similar to Homo
sapiens SMAD, mothers against DPP homolog 4 (SMAD4), mRNA.
ACCESSION AK290770
VERSION AK290770.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2057)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2057
/cell_type="leukemia cell line (myelogenous)"
/clone="JCMLC2000183"
/clone_lib="JCMLC2"
/db_xref="H-InvDB:HIT000423567"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 201..1859
/codon_start=1
/note="highly similar to Homo sapiens SMAD, mothers
against DPP homolog 4 (SMAD4), mRNA"
/protein_id="BAF83459.1"
/transl_table=1
/translation="MDNMSITNTPTSNDACLSIVHSLMCHRQGGESETFAKRAIESLV
KKLKEKKDELDSLITAITTNGAHPSKCVTIQRTLDGRLQVAGRKGFPHVIYARLWRWP
DLHKNELKHVKYCQYAFDLKCDSVCVNPYHYERVVSPGIDLSGLTLQSNAPSSMMVKD
EYVHDFEGQPSLSTEGHSIQTIQHPPSNRASTETYSTPALLAPSESNATSTANFPNIP
VASTSQPASILGGSHSEGLLQIASGPQPGQQQNGFTGQPATYHHNSTTTWTGSRTAPY
TPNLPHHQNGHLQHHPPMPPHPGHYWPVHNELAFQPPISNHPAPEYWCSIAYFEMDVQ
VGETFKVPSSCPIVTVDGYVDPSGGDRFCLGQLSNVHRTEAIERARLHIGKGVQLECK
GEGDVWVRCLSDHAVFVQSYYLDREAGRAPGDAVHKIYPSAYIKVFDLRQCHRQMQQQ
AATAQAAAAAQAAAVAGNIPGPGSVGGIAPAISLSAAAGIGVDDLRRLCILRMSFVKG
WGPDYPRQSIKETPCWIEIHLHRALQLLDEVLHTMPIADPQPLD"
BASE COUNT 559 a 472 c 483 g 543 t
ORIGIN
1 aagcaacaac acggccctgg tcgtcgtcgc cgctgcggta acggagcggt ttgggtggcg
61 gagcctgcgt tcgcgccttc ccgctctcct cgggaggccc ttccttgcaa cgttagctgt
121 tgtttttcac tgtttccaaa ggatcaaaat tgcttcagaa attggagaca tatttgattt
181 aaaaggaaaa acttgaacaa atggacaata tgtctattac gaatacacca acaagtaatg
241 atgcctgtct gagcattgtg catagtttga tgtgccatag acaaggtgga gagagtgaaa
301 catttgcaaa aagagcaatt gaaagtttgg taaagaagct gaaggagaaa aaagatgaat
361 tggattcttt aataacagct ataactacaa atggagctca tcctagtaaa tgtgttacca
421 tacagagaac attggatggg aggcttcagg tggctggtcg gaaaggattt cctcatgtga
481 tctatgcccg tctctggagg tggcctgatc ttcacaaaaa tgaactaaag catgttaaat
541 attgtcagta tgcgtttgac ttaaaatgtg atagtgtctg tgtgaatcca tatcactacg
601 aacgagttgt atcacctgga attgatctct caggattaac actgcagagt aatgctccat
661 caagtatgat ggtgaaggat gaatatgtgc atgactttga gggacagcca tcgttgtcca
721 ctgaaggaca ttcaattcaa accatccagc atccaccaag taatcgtgca tcgacagaga
781 catacagcac cccagctctg ttagccccat ctgagtctaa tgctaccagc actgccaact
841 ttcccaacat tcctgtggct tccacaagtc agcctgccag tatactgggg ggcagccata
901 gtgaaggact gttgcagata gcatcagggc ctcagccagg acagcagcag aatggattta
961 ctggtcagcc agctacttac catcataaca gcactaccac ctggactgga agtaggactg
1021 caccatacac acctaatttg cctcaccacc aaaacggcca tcttcagcac cacccgccta
1081 tgccgcccca tcccggacat tactggcctg ttcacaatga gcttgcattc cagcctccca
1141 tttccaatca tcctgctcct gagtattggt gttccattgc ttactttgaa atggatgttc
1201 aggtaggaga gacatttaag gttccttcaa gctgccctat tgttactgtt gatggatacg
1261 tggacccttc tggaggagat cgcttttgtt tgggtcaact ctccaatgtc cacaggacag
1321 aagccattga gagagcaagg ttgcacatag gcaaaggtgt gcagttggaa tgtaaaggtg
1381 aaggtgatgt ttgggtcagg tgccttagtg accacgcggt ctttgtacag agttactact
1441 tagacagaga agctgggcgt gcacctggag atgctgttca taagatctac ccaagtgcat
1501 atataaaggt ctttgatttg cgtcagtgtc atcgacagat gcagcagcag gcggctactg
1561 cacaagctgc agcagctgcc caggcagcag ccgtggcagg aaacatccct ggcccaggat
1621 cagtaggtgg aatagctcca gctatcagtc tgtcagctgc tgctggaatt ggtgttgatg
1681 accttcgtcg cttatgcata ctcaggatga gttttgtgaa aggctgggga ccggattacc
1741 caagacagag catcaaagaa acaccttgct ggattgaaat tcacttacac cgggccctcc
1801 agctcctaga cgaagtactt cataccatgc cgattgcaga cccacaacct ttagactgag
1861 gtcttttacc gttggggccc ttaaccttat caggatggtg gactacaaaa tacaatcctg
1921 tttataatct gaagatatat ttcacttttg ttctgcttta tcttttcata aagggttgaa
1981 aatgtgtttg ctgccttgct cctagcagac agaaactgga ttaaaacaat tttttttttc
2041 ctcttcagaa cttgtca
//