LOCUS AK290739 1572 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75670 complete cds, highly similar to Homo
sapiens X-ray repair complementing defective repair in Chinese
hamster cells 4 (XRCC4), transcript variant 2, mRNA.
ACCESSION AK290739
VERSION AK290739.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1572)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1572
/cell_line="IMR32"
/cell_type="neuroblastoma"
/clone="IMR322004076"
/clone_lib="IMR322"
/db_xref="H-InvDB:HIT000423536"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
CDS 46..1056
/codon_start=1
/note="highly similar to Homo sapiens X-ray repair
complementing defective repair in Chinese hamster cells 4
(XRCC4), transcript variant 2, mRNA"
/protein_id="BAF83428.1"
/transl_table=1
/translation="MERKISRIHLVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWT
GTVSESEISQEADDMAMEKGKYVGELRKALLSGAGPADVYTFNFSKESCYFFFEKNLK
DVSFRLGSFNLEKVENPAEVIRELICYCLDTIAENQAKNEHLQKENERLLRDWNDVQG
RFEKCVSAKEALETDLYKRFILVLNEKKTKIRSLHNKLLNAAQEREKDIKQEGETAIC
SEMTADRDPVYDESTDEESENQTDLSGLASAAVSKDDSIISSLDVTDIAPSRKRRQRM
QRNLGTEPKMAPQENQLQEKENSRPDSSLPETSKKEHISAENMSLETLRNSSPEDLFD
EI"
BASE COUNT 556 a 247 c 311 g 458 t
ORIGIN
1 tttttggaag ataccggaag tagagtcacg gagaggtatt aagaaatgga gagaaaaata
61 agcagaatcc accttgtttc tgaacccagt ataactcatt ttctacaagt atcttgggag
121 aaaacactgg aatctggttt tgttattaca cttactgatg gtcattcagc atggactggg
181 acagtttctg aatcagagat ttcccaagaa gctgatgaca tggcaatgga aaaagggaaa
241 tatgttggtg aactgagaaa agcattgttg tcaggagcag gaccagctga tgtatacacg
301 tttaattttt ctaaagagtc ttgttatttc ttctttgaga aaaacctgaa agatgtctca
361 ttcagacttg gttccttcaa cctagagaaa gttgaaaacc cagctgaagt cattagagaa
421 cttatttgtt attgcttgga caccattgca gaaaatcaag ccaaaaatga gcacctgcag
481 aaagaaaatg aaaggcttct gagagattgg aatgatgttc aaggacgatt tgaaaaatgt
541 gtgagtgcta aggaagcttt ggagactgat ctttataagc ggtttattct ggtgttgaat
601 gagaagaaaa caaaaatcag aagtttgcat aataaattat taaatgcagc tcaagaacga
661 gaaaaggaca tcaaacaaga aggggaaact gcaatctgtt ctgaaatgac tgctgaccga
721 gatccagtct atgatgagag tactgatgag gaaagtgaaa accaaactga tctctctggg
781 ttggcttcag ctgctgtaag taaagatgat tccattattt caagtcttga tgtcactgat
841 attgcaccaa gtagaaaaag gagacagcga atgcaaagaa atcttgggac agaacctaaa
901 atggctcctc aggagaatca gcttcaagaa aaggaaaatt ccaggcctga ttcttcacta
961 cctgagacgt ctaaaaagga gcacatctca gctgaaaaca tgtctttaga aactctgaga
1021 aacagcagcc cagaagacct ctttgatgag atttaacagt ctcaaaaaat actttgatgt
1081 tcactagact atgttttcta ttcatttctt taaaatgaaa aaggagaatt tcaagtcagc
1141 agccgctatt accgtatctt acaatttaat tacatacaca gtgaattgaa accattgtgc
1201 aaaatggatt acacatgtat acaaagatac gatttgatga tgacactggc acattattct
1261 aaactattca ttcagcatgc ctataattac ataaattgta tgagactttt tgttgcaaag
1321 gacacattta tcatattcat tcacacatat tatatgtgat agctgtccaa catcctgtct
1381 gggaagattt tgaaaacagg acaaagaaaa catcatttta aaatgtcttc agcttttttt
1441 gaatagacgt attcaaacat attctgaaca ttgatgtttg aacattttaa tttgtgtgat
1501 gatgtagaaa atataatttt agtttgtaca taaacattgt gaaaatctga taataaaatt
1561 tttgatacat tg
//