LOCUS AK290679 1590 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77076 complete cds, highly similar to Homo
sapiens polycomb group ring finger 6 (PCGF6), transcript variant
1, mRNA.
ACCESSION AK290679
VERSION AK290679.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1590)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1590
/cell_type="dermal papilla cells (HDPC)"
/clone="HHDPC2004857"
/clone_lib="HHDPC2"
/db_xref="H-InvDB:HIT000423476"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, dermal papilla cells"
/organism="Homo sapiens"
CDS 23..1075
/codon_start=1
/note="highly similar to Homo sapiens polycomb group ring
finger 6 (PCGF6), transcript variant 1, mRNA"
/protein_id="BAF83368.1"
/transl_table=1
/translation="MEGVAVVTAGSVGAAKTEGAAALPPPPPVSPPALTPAPAAGEEG
PAPLSETGAPGCSGSRPPELEPERSLGRFRGRFEDEDEELEEEEELEEEEEEEEEDMS
HFSLRLEGGRQDSEDEEERLINLSELTPYILCSICKGYLIDATTITECLHTFCKSCIV
RHFYYSNRCPKCNIVVHQTQPLYNIRLDRQLQDIVYKLVINLEEREKKQMHDFYKERG
LEVPKPAVPQPVPSSKGRSKKVLESVFRIPPELDMSLLPEFIGANEGTGHFKPLEKKF
VRVSGEATIGHVEKFLRRKMGLDPACQVDIICGDHLLEQYQTLREIRRAIGDAAMQDG
LLVLHYGLVVSPLKIT"
BASE COUNT 441 a 333 c 400 g 416 t
ORIGIN
1 tcgcctggtg tctctcccga ccatggaggg ggtcgcggtg gtgacggcgg gcagcgtagg
61 cgctgccaaa accgagggag ctgcagcctt gccgcctccg cctcctgtct ccccgcccgc
121 cctcacccct gcacccgcag cgggtgagga gggaccggcg cctctgtctg agacgggggc
181 tcccggctgc tccggctccc ggccccctga gctggagccg gagcgcagcc tgggccgctt
241 cagaggccgc ttcgaggacg aggacgagga gttggaagaa gaagaggagc tggaggagga
301 agaagaggag gaggaggagg acatgagtca cttctcgttg aggctggagg gaggccggca
361 ggactcggag gacgaggagg agcgcctgat taatctctct gagctgaccc catacatctt
421 gtgttccatt tgcaaaggtt acttaataga tgcaactacc atcacagaat gtcttcatac
481 cttttgtaaa agctgcatcg taagacattt ttactacagc aacagatgtc caaaatgcaa
541 tatagtagta catcagacac aacctcttta taacataagg ttggaccgac agttacaaga
601 catagtgtac aaattagtga tcaatctaga ggaaagagaa aaaaagcaaa tgcatgattt
661 ctataaagaa agaggtctag aagtacccaa acctgctgtt ccacagccag tcccttcaag
721 caaaggaaga tctaaaaaag tcctagaatc agtgtttcgt attccacctg aacttgatat
781 gtctttatta ccggagttca ttggtgctaa tgaaggcacg ggacatttta agccattgga
841 aaagaagttt gttcgagttt caggagaagc aactattgga catgtagaaa aattcctcag
901 aagaaaaatg ggtcttgatc cagcttgtca ggtagatata atctgtggtg atcacctgtt
961 ggagcagtat caaactctaa gggaaatccg acgtgcaata ggtgatgcag caatgcagga
1021 tggtctgctt gtccttcatt atggtcttgt ggtttctcct ctgaagataa cttgaagatt
1081 ctaggcacat tatgaggagg gaaacaaagg aggcttctgc aggactgcat ctcaccaaag
1141 atttccatga aatgtaattg ctaccacttt gctgttcaag acataactta cctattttta
1201 gcaccaagaa ttatagcgtt tataagtaca acttggaacg atggaatgca tctgttacta
1261 gagactgtat ataaaaagca gccaaagctc aggggaaatt tttcaaaaat tgaattttaa
1321 aatttcttat gattttaaat accttgacat tgattttgct tcccatcttt gaagtaattg
1381 gttagttttc tttgttcagc catttcaagt tggtggttgg gatatctgct ctctgggatg
1441 gcatcagttg ggcagtcatc tttttggaag agaagtgtgc ttttgagtgg aagattcaaa
1501 gccagtcttt gttaaactgc agggtgtact ctcaaagacc aaaactattg gccacttttg
1561 tatgttgcca gcatattttg aacttgtacc
//