LOCUS AK290642 1454 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76023 complete cds, highly similar to Homo
sapiens dermatan sulfate proteoglycan 3 (DSPG3), mRNA.
ACCESSION AK290642
VERSION AK290642.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1454)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1454
/clone="HEMBA1002867"
/clone_lib="HEMBA1"
/db_xref="H-InvDB:HIT000423439"
/db_xref="taxon:9606"
/dev_stage="embryo, 10 weeks"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="whole embryo, mainly head"
CDS 51..1019
/codon_start=1
/note="highly similar to Homo sapiens dermatan sulfate
proteoglycan 3 (DSPG3), mRNA"
/protein_id="BAF83331.1"
/transl_table=1
/translation="MKTLAGLVLGLVIFDAAVTAPTLESINYDSETYDATLEDLDNLY
NYENIPVDKVEIEIATVMPSGNRELLTPPPQPEKAQEEEEEEESTPRLIDGSSPQEPE
FTGVLGPHTNEDFPTCLLCTCISTTVYCDDHELDAIPPLPKNTAYFYSRFNRIKKINK
NDFASLSDLKRIDLTSNLISEIDEDAFRKLPQLRELVLRDNKIRQLPELPTTLTFIDI
SNNRLGRKGIKQEAFKDMYDLHHLYLTDNNLDHIPLPLPENLRALHLQNNNILEMHED
TFCNVKNLTYIRKALEDIRLDGNPINLSKTPQAYMCLPRLPVGSLV"
BASE COUNT 483 a 303 c 253 g 415 t
ORIGIN
1 agtcactttg tgccatttca tcaggtcaga gccaaaggaa agcttgaaaa atgaagacat
61 tagcaggact tgttctggga cttgtcatct ttgatgctgc tgtgactgcc ccaactctag
121 agtccatcaa ctatgactca gaaacctatg atgccacctt agaagacctg gataatttgt
181 acaactatga aaacatacct gttgataaag ttgagattga aatagccaca gtgatgcctt
241 cagggaacag agagctcctc actccacccc cacagcctga gaaggcccag gaagaggaag
301 aggaggagga atctactccc aggctgattg atggctcttc tccccaggag cctgaattca
361 caggggttct ggggccacac acaaatgaag actttccaac ctgtcttttg tgtacttgta
421 taagtaccac cgtgtactgt gatgaccatg aacttgatgc tattcctccg ctgccaaaga
481 acaccgctta tttctattcc cgctttaaca gaattaaaaa gatcaacaaa aatgactttg
541 caagcctaag tgatttaaaa aggattgatc tgacatcaaa tttaatatct gagattgatg
601 aagatgcatt ccgaaaactg cctcaacttc gagagcttgt cctgcgtgac aacaaaataa
661 ggcagctccc agaattgcca accactttga catttattga tattagcaac aatagacttg
721 gaaggaaagg gataaagcaa gaagcattta aagacatgta tgatctccat catctgtacc
781 tcactgataa caacttggac cacatccctc tgccactccc agaaaatcta cgagcccttc
841 acctccagaa taacaacatt ctggaaatgc acgaagatac gttctgcaat gttaaaaatt
901 tgacttatat tcgtaaggca ctagaggaca ttcgattgga tggaaaccct attaatctca
961 gcaaaactcc tcaagcatac atgtgtctac ctcgtctgcc tgttgggagc cttgtctaat
1021 ttcagataat ggttagcatt acgatggcta ctataaataa accattctta ctgctctctt
1081 ccaaaacaaa actcagcatg atactttgag attgtgttct gagagatgat atgactacat
1141 aaaatacaat taaaaatgtt ataatgaaaa tgtagtaatt tacgaaaaca ccagatgagt
1201 taggaataaa cctataacat ttacaaaaag agcaaaacta agtgatagaa aatatttcac
1261 acatgttctt atagatcatg tatcacttgc aagttttagg agttcatatc ctatatcatt
1321 tcaaattaag tacataataa agtaaaattt tgaaatgaac actttaggta tttttgccaa
1381 gatttagatg tttttaatta aacttttctc ttcctttttt tttcactaaa gcatgtttat
1441 tcccctaatc catt
//