LOCUS AK290618 2123 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76116 complete cds, highly similar to Homo
sapiens potassium voltage-gated channel, KQT-like subfamily,
member 1 (KCNQ1), transcript variant 2, mRNA.
ACCESSION AK290618
VERSION AK290618.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2123)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2123
/clone="HEART2004758"
/clone_lib="HEART2"
/db_xref="H-InvDB:HIT000423415"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="heart"
CDS 248..1897
/codon_start=1
/note="highly similar to Homo sapiens potassium
voltage-gated channel, KQT-like subfamily, member 1
(KCNQ1), transcript variant 2, mRNA"
/protein_id="BAF83307.1"
/transl_table=1
/translation="MDFLIVLVCLIFSVLSTIEQYAALATGTLFWMEIVLVVFFGTEY
VVRLWSAGCRSKYVGLWGRLRFARKPISIIDLIVVVASMVVLCVGSKGQVFATSAIRG
IRFLQILRMLHVDRQGGTWRLLGSVVFIHRQELITTLYIGFLGLIFSSYFVYLAEKDA
VNESGRVEFGSYADALWWGVVTVTTIGYGDKVPQTWVGKTIASCFSVFAISFFALPAG
ILGSGFALKVQQKQRQKHFNRQIPAAASLIQTAWRCYAAENPDSSTWKIYIRKAPRSH
TLLSPSPKPKKSVVVKKKKFKLDKDNGVTPGEKMLTVPHITCDPPEERRLDHFSVDGY
DSSVRKSPTLLEVSMPHFMRTNSFAEDLDLEGETLLTPITHISQLREHHRATIKVIRR
MQYFVAKKKFQQARKPYDVRDVIEQYSQGHLNLMVRIKELQRRLDQSIGKPSLFISVS
EKSKDRGSNTIGARLNRVEDKVTQLDQRLALITDMLHQLLSLHGGSTPGSGGPPREGG
AHITQPCGSGGSVDPELFLPSNTLPTYEQLTVPRRGPDEGS"
BASE COUNT 408 a 662 c 648 g 405 t
ORIGIN
1 atggcctggg gctgtgagag gcccgggaag gcactgtctt tgcgcctgca catgtgtgtg
61 tctggagtgt aggatggcac tggtgccggg cctggattta ctcagcccag atcacggctg
121 cttttgttta cgtggcccct gctctcaccc acaactccag gtttctggct ctcgggaatt
181 tgaggcctgt ggctgctgtg gaccctggga aagagcctgt gcttcctgag ccagtgcggg
241 gcctggcatg gacttcctca tcgtcctggt ctgcctcatc ttcagcgtgc tgtccaccat
301 cgagcagtat gccgccctgg ccacggggac tctcttctgg atggagatcg tgctggtggt
361 gttcttcggg acggagtacg tggtccgcct ctggtccgcc ggctgccgca gcaagtacgt
421 gggcctctgg gggcggctgc gctttgcccg gaagcccatt tccatcatcg acctcatcgt
481 ggtcgtggcc tccatggtgg tcctctgcgt gggctccaag gggcaggtgt ttgccacgtc
541 ggccatcagg ggcatccgct tcctgcagat cctgaggatg ctacacgtcg accgccaggg
601 aggcacctgg aggctcctgg gctccgtggt cttcatccac cgccaggagc tgataaccac
661 cctgtacatc ggcttcctgg gcctcatctt ctcctcgtac tttgtgtacc tggctgagaa
721 ggacgcggtg aacgagtcag gccgcgtgga gttcggcagc tacgcagatg cgctgtggtg
781 gggggtggtc acagtcacca ccatcggcta tggggacaag gtgccccaga cgtgggtcgg
841 gaagaccatc gcctcctgct tctctgtctt tgccatctcc ttctttgcgc tcccagcggg
901 gattcttggc tcggggtttg ccctgaaggt gcagcagaag cagaggcaga agcacttcaa
961 ccggcagatc ccggcggcag cctcactcat tcagaccgca tggaggtgct atgctgccga
1021 gaaccccgac tcctccacct ggaagatcta catccggaag gccccccgga gccacactct
1081 gctgtcaccc agccccaaac ccaagaagtc tgtggtggta aagaaaaaaa agttcaagct
1141 ggacaaagac aatggggtga ctcctggaga gaagatgctc acagtccccc atatcacgtg
1201 cgacccccca gaagagcggc ggctggacca cttctctgtc gacggctatg acagttctgt
1261 aaggaagagc ccaacactgc tggaagtgag catgccccat ttcatgagaa ccaacagctt
1321 cgccgaggac ctggacctgg aaggggagac tctgctgaca cccatcaccc acatctcaca
1381 gctgcgggaa caccatcggg ccaccattaa ggtcattcga cgcatgcagt actttgtggc
1441 caagaagaaa ttccagcaag cgcggaagcc ttacgatgtg cgggacgtca ttgagcagta
1501 ctcgcagggc cacctcaacc tcatggtgcg catcaaggag ctgcagagga ggctggacca
1561 gtccattggg aagccctcac tgttcatctc cgtctcagaa aagagcaagg atcgcggcag
1621 caacacgatc ggcgcccgcc tgaaccgagt agaagacaag gtgacgcagc tggaccagag
1681 gctggcactc atcaccgaca tgcttcacca gctgctctcc ttgcacggtg gcagcacccc
1741 cggcagcggc ggccccccca gagagggcgg ggcccacatc acccagccct gcggcagtgg
1801 cggctccgtc gaccctgagc tcttcctgcc cagcaacacc ctgcccacct acgagcagct
1861 gaccgtgccc aggaggggcc ccgatgaggg gtcctgagga ggggatgggg ctgggggatg
1921 ggcctgagtg agaggggagg ccaagagtgg ccccacctgg ccctctctga aggaggccac
1981 ctcctaaaag gcccagagag aagagcccca ctctcagagg ccccaatacc ccatggacca
2041 tgctgtctgg cacagcctgc acttgggggc tcagcaaggc cacctcttcc tggccggtgt
2101 gggggccccg tctcaggtct gag
//