LOCUS AK290596 2417 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75650 complete cds, highly similar to Homo
sapiens dachshund homolog 2 (Drosophila) (DACH2), mRNA.
ACCESSION AK290596
VERSION AK290596.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2417)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2417
/cell_type="chondrocytes (HC)"
/clone="HCHON2006496"
/clone_lib="HCHON2"
/db_xref="H-InvDB:HIT000423393"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, chondrocytes"
/organism="Homo sapiens"
CDS 171..1970
/codon_start=1
/note="highly similar to Homo sapiens dachshund homolog 2
(Drosophila) (DACH2), mRNA"
/protein_id="BAF83285.1"
/transl_table=1
/translation="MAVSASPVISATSSGAGVPGGLFRAEPLYSTPREPPRLTPNMIN
SFVVNNHSNSAGGGGRGNTNTNECRMVDMHGMKVASFLMDGQELICLPQVFDLFLKHL
VGGLHTVYTELKRLDISPVVCTVEQVRILRGLGAIQPGVNRCKLITRKDFETLFTDCT
NARRKRQMTRKQAVNSSRPGRPPKRSLGVLQENARLLTHAVPGLLSPGLITPTGITAA
AMAEAMKLQKMKLMAMNTLQGNGSQNGTESEPDDLNSNTGGSESSWDKDKMQSPFAAP
GPQHGIAHAALAVQPGIGGAPTLNPLQQNHLLTNRLDLPFMMMPHPLLPVSLPPASVA
MAMNQMNHLNTIANMAAAAQIHSPLSRAGTSVIKERIPESPSPAPSLEENHRPGSQTS
SHTSSSVSSSPSQMDHHLERMEEVPVQIPIMKSPLDKIQLTPGQALPAGFPGPFIFAD
SLSSVETLLTNIQGLLKVALDNARIQEKQIQQEKKELRLELYREREIRENLERQLAVE
LQSRTTMQKRLKKEKKTKRKLQEALEFESKRREQVEQALKQATTSDSGLRMLKDTGIP
DIEIENNGTPHDSAAMQGGNYYCLEMAQQLYSA"
BASE COUNT 682 a 565 c 583 g 587 t
ORIGIN
1 actgtttgtt gagcttgagc gtgagccggc tgctgaagac ttgcgaacag ttcggagcca
61 gcgagagcgc gccagagaga gcgagagtga gggagtgagt gcgaggggat ctagaggagt
121 cagggcgaga aagcgagggc cggaggaccc acgatagaga cagagtgacc atggctgtct
181 ccgcatctcc agtgatctct gcaacttcca gcggcgccgg cgtcccgggg ggcttattcc
241 gggccgaacc cctgtactcg actcccagag agccccctcg tcttactcct aatatgatca
301 atagtttcgt ggttaataac cacagcaaca gtgccggagg cggcggcagg ggcaacacca
361 acaccaacga gtgccgcatg gtcgacatgc acgggatgaa ggtggcttcg ttcctgatgg
421 acggccagga actgatctgc ctgccgcaag tctttgatct ttttctcaag cacctggtgg
481 gaggcttgca cactgtgtac accgagctga agagactgga tatatccccc gtggtgtgta
541 ctgttgagca ggtccggatc ctccgcgggc tgggggccat ccagcccggg gtaaaccgct
601 gcaaactcat caccaggaaa gacttcgaaa ctttgttcac cgattgcacc aatgccagaa
661 ggaagaggca aatgacaaga aaacaagctg ttaacagttc aagacccggc aggcccccta
721 agcgttcttt gggagtgttg caggaaaatg cccgccttct gacccatgca gtcccaggcc
781 tcttatcgcc aggacttatc actccgacag gtataacagc tgcagcgatg gctgaggcga
841 tgaaacttca gaagatgaag cttatggcta tgaacactct tcagggaaat ggaagccaaa
901 atgggaccga atcagagcct gatgatctta attctaacac aggtggaagt gaatcctcct
961 gggataaaga taagatgcag tctccatttg ctgcacctgg accccaacat ggaattgctc
1021 atgcagccct agctgtccag ccaggcattg ggggtgctcc aaccctcaat ccactgcagc
1081 agaaccacct gctaaccaat agactggatc tgccatttat gatgatgcct catcccctac
1141 ttccagtcag cttacctcct gcatcagttg ccatggcaat gaatcagatg aaccatctca
1201 atactattgc caacatggct gctgcagcac agattcacag tccactctcc agagctggta
1261 cctctgttat aaaggagcgg atcccagaga gtccttctcc tgctccttct ctagaagaga
1321 atcatcgtcc tgggagccag acctcttccc acaccagcag cagtgtgtcc agctctccct
1381 ctcagatgga tcatcatttg gaaagaatgg aagaggtacc agttcaaatt ccaataatga
1441 agtcaccctt ggacaagata cagctgactc ctgggcaggc attgcccgct ggattccctg
1501 gaccattcat ttttgctgat agtctgtcct ccgtggagac tctgttgacc aacattcagg
1561 gtctgctgaa agttgctttg gataatgctc gcatccagga gaagcagatt caacaagaaa
1621 agaaggagct gcgactggag ctctatagag agagagaaat tagagaaaac cttgaaagac
1681 aacttgcagt tgagcttcaa agcagaacta ctatgcaaaa gcgcctgaag aaggagaaaa
1741 aaaccaagag aaaattgcag gaagccttgg aatttgaatc aaagcgccgg gagcaagtgg
1801 agcaggcact taagcaagcc accactagtg acagtggcct gaggatgtta aaagatactg
1861 gaattccaga tattgaaata gaaaacaatg ggactcctca tgatagtgct gctatgcaag
1921 gaggtaacta ttactgttta gaaatggcac aacagttgta ttcagcctga aaggtcctcg
1981 ctggctttac ataaatgaag atgcttgtga ttccagttta tctctgaaac tattcaacat
2041 ggagttattt cagttttgtt tatcagcaaa gctttgttta ctgaaggagc tatttaatct
2101 atgttacatt aaaaaagaaa cgcgtgtaca ttttaaaagc aatgatgtaa actttgttct
2161 tgcattagac tgaccagttt aaaaatatga actaaatcct aatggctaaa gtaacttgac
2221 catatttgat gcttttctat gctcatttca acttggcttt ttgtctttta aatttttaaa
2281 aaatgcagta gtgtgttaga gactagaaag ttatatgtat ggtttccctg ttctactata
2341 cataacgtta aagtacacct tctttgttaa aaatgtactt gctaaacttc agcgtaaata
2401 aaaacatttt gactttg
//