LOCUS AK290590 2482 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77492 complete cds, highly similar to Human
nuclear receptor hTAK1 (hTAK1) mRNA.
ACCESSION AK290590
VERSION AK290590.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2482)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2482
/cell_type="chondrocytes (HC)"
/clone="HCHON2003010"
/clone_lib="HCHON2"
/db_xref="H-InvDB:HIT000423387"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, chondrocytes"
/organism="Homo sapiens"
CDS 363..2153
/codon_start=1
/note="highly similar to Human nuclear receptor hTAK1
(hTAK1) mRNA"
/protein_id="BAF83279.1"
/transl_table=1
/translation="MTSPSPRIQIISTDSAVASPQRIQIVTDQQTGQKIQIVTAVDAS
GSPKQQFILTSPDGAGTGKVILASPETSSAKQLIFTTSDNLVPGRIQIVTDSASVERL
LGKTDVQRPQVVEYCVVCGDKASGRHYGAVSCEGCKGFFKRSVRKNLTYSCRSNQDCI
INKHHRNRCQFCRLKKCLEMGMKMESVQSERKPFDVQREKPSNCAASTEKIYIRKDLR
SPLIATPTFVADKDGARQTGLLDPGMLVNIQQPLIREDGTVLLATDSKAETSQGALGT
LANVVTSLANLSESLNNGDTSEIQPEDQSASEITRAFDTLAKALNTTDSSSSPSLADG
IDTSGGGSIHVISRDQSTPIIEVEGPLLSDTHVTFKLTMPSPMPEYLNVHYICESASR
LLFLSMHWARSIPAFQALGQDCNTSLVRACWNELFTLGLAQCAQVMSLSTILAAIVNH
LQNSIQEDKLSGDRIKQVMEHIWKLQEFCNSMAKLDIDGYEYAYLKAIVLFSPDHPGL
TSTSQIEKFQEKAQMELQDYVQKTYSEDTYRLARILVRLPALRLMSSNITEELFFTGL
IGNVSIDSIIPYILKMETAEYNGQITGASL"
BASE COUNT 659 a 714 c 586 g 523 t
ORIGIN
1 aacattcgcc ctcctcctac cagcgcgcgg gcggcggcgg cggcggcacc ggggtcacga
61 actctgacct ttcactgaca aaaacaataa caaacccccc cttctccgcg accccggcgg
121 cgcccccggg cccgtccccg ccaccccgct cccacctcgg cgtctcgtct ctcgcccgct
181 gccccgcgag cccgcggccc ccgggctccc gccatccgcc gacaccggga gcccgggctc
241 catccgccct gccctccgcg ccgggggccg cccgccgcag acacgggacc cgcttcgagg
301 ccgctttggc gccaaatcct gaggtaacac gtacacagac ctctcggccg gaatctccag
361 ggatgaccag cccctcccca cgcatccaga taatctccac cgactctgct gtagcctcac
421 ctcagcgcat tcagattgtc acagaccagc agacaggaca gaaaatccag atagtcaccg
481 cagtggacgc ctccggatcc cccaaacagc agttcatcct gaccagccca gatggagctg
541 gaactgggaa ggtgatcctg gcttccccag agacatccag cgccaagcaa ctcatattca
601 ccacctcaga caacctcgtc cctggcagga tccagattgt cacggattct gcctctgtgg
661 agcgtttact ggggaagacg gacgtccagc ggccccaggt ggtagagtac tgtgtggtct
721 gtggcgacaa agcctccggc cgtcactatg gggctgtcag ttgtgaaggt tgcaaaggtt
781 tcttcaaaag gagtgtgagg aaaaatttga cctacagctg ccggagcaac caagactgca
841 tcatcaataa acatcaccgg aaccgctgtc agttttgccg gctgaaaaaa tgcttagaga
901 tgggcatgaa aatggaatct gtgcagagtg aacggaagcc cttcgatgtg caacgggaga
961 aaccaagcaa ttgtgctgct tcaactgaga aaatctatat ccggaaagac ctgagaagtc
1021 ccctgatagc tactcccacg tttgtggcag acaaagatgg agcaagacaa acaggtcttc
1081 ttgatccagg gatgcttgtg aacatccagc agcctttgat acgtgaggat ggtacagttc
1141 tcctggccac ggattctaag gctgaaacaa gccagggagc tctgggcaca ctggcaaatg
1201 tagtgacctc ccttgccaac ctaagtgaat ctttgaacaa cggtgacact tcagaaatcc
1261 agccagagga ccagtctgca agtgagataa ctcgggcatt tgatacctta gctaaagcac
1321 ttaataccac agacagctcc tcttctccaa gcttggcaga tgggatagac accagtggag
1381 gagggagcat ccacgtcatc agcagagacc agtcgacacc catcattgag gttgaaggcc
1441 ccctcctttc agacacacac gtcacattta agctaacaat gcccagtcca atgccagagt
1501 acctcaacgt gcactacatc tgtgagtctg catcccgtct gcttttcctc tcaatgcact
1561 gggctcggtc aatcccagcc tttcaggcac ttgggcagga ctgcaacacc agccttgtgc
1621 gggcctgctg gaatgagctc ttcaccctcg gcctggccca gtgtgcccag gtcatgagtc
1681 tctccaccat cctggctgcc attgtcaacc acctgcagaa cagcatccag gaagataaac
1741 tttctggtga ccggataaag caagtcatgg agcacatctg gaagctgcag gagttctgta
1801 acagcatggc gaagctggat atagatggct atgagtatgc ataccttaaa gctatagttc
1861 tctttagccc cgatcatcca ggtttgacca gcacaagcca gattgaaaaa ttccaagaaa
1921 aggcacagat ggagttgcag gactatgttc agaaaaccta ctcagaagac acctaccgat
1981 tggcccggat cctcgttcgc ctgccggcac tcaggctgat gagctccaac ataacagaag
2041 aacttttttt tactggtctc attggcaatg tttcgataga cagcataatc ccctacatcc
2101 tcaagatgga gacagcagag tataatggcc agatcaccgg agccagtcta tagcgcaaac
2161 cacacacctg ccaaggagca acagaatcct tccaggaccg ttcacataca aagaaaagta
2221 gtggtatttt ggtatgtgca aatatttcca tatgttagcc atttcctgtc tggtttctcc
2281 ttatctgtta atcccagaca atagcaatta aaagactagt aggatccttt cctgacataa
2341 gaaatgtttt aatgcctttt gatgaagcag cagattttgg aacaatcttt taactcaatt
2401 tgtatttaga aattctcaaa gggcaaaaaa caaaaaaaaa ggttttataa tgtcagagac
2461 tagtattaaa gaaaactgaa ag
//