LOCUS AK290559 2215 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78367 complete cds, highly similar to Homo
sapiens fibrinogen, A alpha polypeptide (FGA), transcriptvariant
alpha, mRNA.
ACCESSION AK290559
VERSION AK290559.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2215)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2215
/clone="FEHRT2001562"
/clone_lib="FEHRT2"
/db_xref="H-InvDB:HIT000423356"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="heart"
CDS 64..1998
/codon_start=1
/note="highly similar to Homo sapiens fibrinogen, A alpha
polypeptide (FGA), transcriptvariant alpha, mRNA"
/protein_id="BAF83248.1"
/transl_table=1
/translation="MFSMRIVCLVLSVVGTAWTADSGEGDFLAEGGGVRGPRVVERHQ
SACKDSDWPFCSDEDWNYKCPSGCRMKGLIDEVNQDFTNRINKLKNSLFEYQKNNKDS
HSLTTNIMEILRGDFSSANNRDNTYNRVSEDLRSRIEVLKRKVIEKVQHIQLLQKNVR
AQLVDMKRLEVDIDIKVRSCRGSCSRALAREVDLKDYEDQQKQLEQVIAKDLLPSRDR
QHLPLIKMKPVPDLVPGNFKSQLQKVPPEWKALTDMPQMRMELERPGGNEITRGGSTS
YGTGSETESPRNPSSAGSWNSGSSGPGSTGNRNPGSSGTGGTATWKPGSSGPGSAGSW
NSGSSGTGSTGNQNPGSPRPGSTGTWNPGSSERGSAGHWTSESSVSGSTGQWHSESGS
FRPDSPGSGNARPNNPDWGTFEEVSGNVSPGTRREYHTEKLVTSKGDKELRTGKEKVT
SGSTTTTRRSCSKTVTKTVIGPDGHKEVTKEVVTSEDGSDCPEAMDLGTLSGIGTLDG
FRHRHPDEAAFFDTASTGKTFPGFFSPMLGEFVSETESRGSESGIFTNTKESSSHHPG
IAEFPSRGKSSSYSKQFTSSTSYNRGDSTFESKSYKMADEAGSEADHEGTHSTKRGHA
KSRPVRGIHTSPLGKPSLSP"
BASE COUNT 646 a 490 c 557 g 522 t
ORIGIN
1 aaaaaaaaaa tcctttcttt cagctggagt gctcctcagg agccagcccc acccttagaa
61 aagatgtttt ccatgaggat cgtctgcctg gtcctaagtg tggtgggcac agcatggact
121 gcagatagtg gtgaaggtga ctttctagct gaaggaggag gcgtgcgtgg cccaagggtt
181 gtggaaagac atcaatctgc ctgcaaagat tcagactggc ccttctgctc tgatgaagac
241 tggaactaca aatgcccttc tggctgcagg atgaaagggt tgattgatga agtcaatcaa
301 gattttacaa acagaataaa taagctcaaa aattcactat ttgaatatca gaagaacaat
361 aaggattctc attcgttgac cactaatata atggaaattt tgagaggcga tttttcctca
421 gccaataacc gtgataatac ctacaaccga gtgtcagagg atctgagaag cagaattgaa
481 gtcctgaagc gcaaagtcat agaaaaagta cagcatatcc agcttctgca gaaaaatgtt
541 agagctcagt tggttgatat gaaacgactg gaggtggaca ttgatattaa ggtccgatct
601 tgtcgagggt catgcagtag ggctttagct cgtgaagtag atctgaagga ctatgaagat
661 cagcagaagc aacttgaaca ggtcattgcc aaagacttac ttccctctag agataggcaa
721 cacttaccac tgataaaaat gaaaccagtt ccagacttgg ttcccggaaa ttttaagagc
781 cagcttcaga aggtaccccc agagtggaag gcattaacag acatgccgca gatgagaatg
841 gagttagaga gacctggtgg aaatgagatt actcgaggag gctccacctc ttatggaacc
901 ggatcagaga cggaaagccc caggaaccct agcagtgctg gaagctggaa ctctgggagc
961 tctggacctg gaagtactgg aaaccgaaac cctgggagct ctgggactgg agggactgca
1021 acctggaaac ctgggagctc tggacctgga agtgctggaa gctggaactc tgggagctct
1081 ggaactggaa gtactggaaa ccaaaaccct gggagcccta gacctggtag taccggaacc
1141 tggaatcctg gcagctctga acgcggaagt gctgggcact ggacctctga gagctctgta
1201 tctggtagta ctggacaatg gcactctgaa tctggaagtt ttaggccaga tagcccaggc
1261 tctgggaacg cgaggcctaa caacccagac tggggcacat ttgaagaggt gtcaggaaat
1321 gtaagtccag ggacaaggag agagtaccac acagaaaaac tggtcacttc taaaggagat
1381 aaagagctca ggactggtaa agagaaggtc acctctggta gcacaaccac cacgcgtcgt
1441 tcatgctcta aaaccgttac taagactgtt attggtcctg atggtcacaa agaagttacc
1501 aaagaagtgg tgacctccga agatggttct gactgtcccg aggcaatgga tttaggcaca
1561 ttgtctggca taggtactct ggatgggttc cgccataggc accctgatga agctgccttc
1621 ttcgacactg cctcaactgg aaaaacattc ccaggtttct tctcacctat gttaggagag
1681 tttgtcagtg agactgagtc taggggctca gaatctggca tcttcacaaa tacaaaggaa
1741 tccagttctc atcaccctgg gatagctgaa ttcccttccc gtggtaaatc ttcaagttac
1801 agcaaacaat ttactagtag cacgagttac aacagaggag actccacatt tgaaagcaag
1861 agctataaaa tggcagatga ggccggaagt gaagccgatc atgaaggaac acatagcacc
1921 aagagaggcc atgctaaatc tcgccctgtc agaggtatcc acacttctcc tttggggaag
1981 ccttccctgt ccccctagac taagttaaat atttctgcac agtgttccca tggccccttg
2041 catttccttc ttaactctct gttacacgtc attgaaacta cacttttttg gtctgttttt
2101 gtgctagact gtaagttcct tgggggcagg gcctttgtct gtctcatctc tgtattccca
2161 aatgcctaac cgtacagagc catgactcaa taaatacatg ttaaatggat gaatg
//