LOCUS AK290514 2486 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78121 complete cds, highly similar to Homo
sapiens transmembrane 9 superfamily member 2 (TM9SF2), mRNA.
ACCESSION AK290514
VERSION AK290514.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2486)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2486
/clone="FCBBF3026425"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000423311"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 189..2180
/codon_start=1
/note="highly similar to Homo sapiens transmembrane 9
superfamily member 2 (TM9SF2), mRNA"
/protein_id="BAF83203.1"
/transl_table=1
/translation="MSARLPVLSPPRWPRLLLLSLLLLGAVPGPRRSGAFYLPGLAPV
NFCDEEKKSDECKAEIELFVNRLDSVESVLPYEYTAFDFCQASEGKRPSENLGQVLFG
ERIEPSPYKFTFNKKETCKLVCTKTYHTEKAEDKQKLEFLKKSMLLNYQHHWIVDNMP
VTWCYDVEDGQRFCNPGFPIGCYITDKGHAKDACVISSDFHERDTFYIFNHVDIKIYY
HVVETGSMGARLVAAKLEPKSFKHTHIDKPDCSGPPMDISNKASGEIKIAYTYSVSFE
EDDKIRWASRWDYILESMPHTHIQWFSIMNSLVIVLFLSGMVAMIMLRTLHKDIARYN
QMDSTEDAQEEFGWKLVHGDIFRPPRKGMLLSVFLGSGTQILIMTFVTLFFACLGFLS
PANRGALMTCAVVLWVLLGTPAGYVAARFYKSFGGEKWKTNVLLTSFLCPGIVFADFF
IMNLILWGEGSSAAIPFGTLVAILALWFCISVPLTFIGAYFGFKKNAIEHPVRTNQIP
RQIPEQSFYTKPLPGIIMGGILPFGCIFIQLFFILNSIWSHQMYYMFGFLFLVFIILV
ITCSEATILLCYFHLCAEDYHWQWRSFLTSGFTAVYFLIYAVHYFFSKLQITGTASTI
LYFGYTMIMVLIFFLFTGTIGFFACFWFVTKIYSVVKVD"
BASE COUNT 638 a 524 c 535 g 789 t
ORIGIN
1 atgctctgtt gcggtccgct tcggtttctg ttgcgggacc cggggtgtct cctagcgcaa
61 ccggaactag ccttctgggg gccggcttcc tttatctctg gcggccttgt agtcgtctcc
121 gagactcccc acccctcctt ccctcttgac cccccaggtt tgattgccct ttccccgaaa
181 caactatcat gagcgcgagg ctgccggtgt tgtctccacc tcggtggccg cggctgttgc
241 tgctgtcgct gctcctgttg ggggcggttc ctggcccgcg ccggagcggc gctttctacc
301 tgcccggcct ggcgcccgtc aacttctgcg acgaagaaaa aaagagcgac gagtgcaagg
361 ccgaaataga actatttgtg aacagacttg attcagtgga atcagttctt ccttatgaat
421 acacagcgtt tgatttttgc caagcatcag aaggaaagcg cccatctgaa aatcttggtc
481 aggtactatt cggggaaaga attgaacctt caccatataa gtttacgttt aataagaagg
541 agacctgtaa gcttgtttgt acaaaaacat accatacaga gaaagctgaa gacaaacaaa
601 agttagaatt cttgaaaaaa agcatgttat tgaattatca acatcactgg attgtggata
661 atatgcctgt aacgtggtgt tacgatgttg aagatggtca gaggttctgt aatcctggat
721 ttcctattgg ctgttacatt acagataaag gccatgcaaa agatgcctgt gttattagtt
781 cagatttcca tgaaagagat acattttaca tcttcaacca tgttgacatc aaaatatact
841 atcatgttgt tgaaactggg tccatgggag caagattagt ggctgctaaa cttgaaccga
901 aaagcttcaa acatacccat atagataaac cagactgctc agggcccccc atggacataa
961 gtaacaaggc ttctggggag ataaaaattg cctatactta ctctgttagc ttcgaggaag
1021 atgataagat cagatgggcg tctagatggg actatattct ggagtctatg cctcataccc
1081 acattcagtg gtttagcatt atgaattccc tggtcattgt tctcttctta tctggaatgg
1141 tagctatgat tatgttacgg acactgcaca aagatattgc tagatataat cagatggact
1201 ctacggaaga tgcccaggaa gaatttggct ggaaacttgt tcatggtgat atattccgtc
1261 ctccaagaaa agggatgctg ctatcagtct ttctaggatc cgggacacag attttaatta
1321 tgacctttgt gactctattt ttcgcttgcc tgggattttt gtcacctgcc aaccgaggag
1381 cgctgatgac gtgtgctgtg gtcctgtggg tgctgctggg cacccctgca ggctatgttg
1441 ctgccagatt ctataagtcc tttggaggtg agaagtggaa aacaaatgtt ttattaacat
1501 catttctttg tcctgggatt gtatttgctg acttctttat aatgaatctg atcctctggg
1561 gagaaggatc ttcagcagct attccttttg ggacactggt tgccatattg gccctttggt
1621 tctgcatatc tgtgcctctg acgtttattg gtgcatactt tggttttaag aagaatgcca
1681 ttgaacaccc agttcgaacc aatcagattc cacgtcagat tcctgaacag tcgttctaca
1741 cgaagccctt gcctggtatt atcatgggag ggattttgcc ctttggctgc atctttatac
1801 aacttttctt cattctgaat agtatttggt cacaccagat gtattacatg tttggcttcc
1861 tatttctggt gtttatcatt ttggttatta cctgttctga agcaactata cttctttgct
1921 atttccacct atgtgcagag gattatcatt ggcaatggcg ttcattcctt acgagtggct
1981 ttactgcagt ttatttctta atctatgcag tacactactt cttttcaaaa ctgcagatca
2041 cgggaacagc aagcacaatt ctgtactttg gttataccat gataatggtt ttgatcttct
2101 ttctttttac aggaacaatt ggcttctttg catgcttttg gtttgttacc aaaatataca
2161 gtgtggtgaa ggttgactga agaagtccag tgtgtccagt taaaacagaa ataaattaaa
2221 ctcttcatca acaaagacct gtttttgtga ctgccttgag ttttatcaga attattggcc
2281 tagtaatcct tcagaaacac cgtaattcta aataaacctc ttcccataca cctttccccc
2341 ataagatgtg tcttcaacac tataaagcat ttgtattgtg atttgattaa gtatatattt
2401 ggttgttctc aatgaagagc aaatttaaat attatgtgca tttgtaaata cagtagctat
2461 aaaattttcc atacttctaa tggcag
//