LOCUS AK290500 3304 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77978 complete cds, highly similar to Homo
sapiens unc-5 homolog C (C. elegans) (UNC5C), mRNA.
ACCESSION AK290500
VERSION AK290500.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3304)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3304
/clone="FCBBF3018714"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000423297"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 165..2960
/codon_start=1
/note="highly similar to Homo sapiens unc-5 homolog C (C.
elegans) (UNC5C), mRNA"
/protein_id="BAF83189.1"
/transl_table=1
/translation="MRKGLRATAARCGLGLGYLLQMLVLPALALLSASGTGSAAQDDD
FFHELPETFPSDPPEPLPHFLIEPEEAYIVKNKPVNLYCKASPATQIYFKCNSEWVHQ
KDHIVDERVDETSGLIVREVSIEISRQQVEELFGPEDYWCQCVAWSSAGTTKSRKAYV
RIAYLRKTFEQEPLGKEVSLEQEVLLQCRPPEGIPVAEVEWLKNEDIIDPVEDRNFYI
TIDHNLIIKQARLSDTANYTCVAKNIVAKRKSTTATVIVYVNGGWSTWTEWSVCNSRC
GRGYQKRTRTCTNPAPLNGGAFCEGQSVQKIACTTLCPVDGRWTPWSKWSTCGTECTH
WRRRECTAPAPKNGGKDCDGLVLQSKNCTDGLCMQTAPDSDDVALYVGIVIAVIVCLA
ISVVVALFVYRKNHRDFESDIIDSSALNGGFQPVNIKAARQDLLAVPPDLTSAAAMYR
GPVYALHDVSDKIPMTNSPILDPLPNLKIKVYNTSGAVTPQDDLSEFTSKLSPQMTQS
LLENEALSLKNQSLARQTDPSCTAFGSFNSLGGHLIVPNSGVSLLIPAGAIPQGRVYE
MYVTVHRKETMRPPMDDSQTLLTPVVSCGPPGALLTRPVVLTMHHCADPNTEDWRILL
KNQAAQGQWEDVVVVGEENFTTPCYIQLDAEACHILTENLSTYALVGHSTTKAAAKRL
KLAIFGPLCCSSLEYSIRVYCLDDTQDALKEILHLERQTGGQLLEEPKALHFKGSTHN
LRLSIHDIAHSLWKSKLLAKYQEIPFYHVWSGSQRNLHCTFTLERFSLNTVELVCKLC
VRQVEGEGQIFQLNCTVSEEPTGIDLPLLDPASTITTVTGPSAFSIPLPIRQKLCSSL
DAPQTRGHDWRMLAHKLNLDRYLNYFATKSSPTGVILDLWEAQNFPDGNLSMLAAVLE
EMGRHETVVSLAAEGQY"
BASE COUNT 826 a 860 c 853 g 765 t
ORIGIN
1 cttttggccc ctgcctttgg agaaagtgga gtgtggcgct tggttgtcgt tatttcttcg
61 gactgcttcg cggtgcacgg attcagcttc tgcccagtgg ggctttcagc tgtttgcgcg
121 tctctctgtc cccctcccct ccccccggca cacctctgtc tacgatgagg aaaggtctgc
181 gggcgacggc ggcccgctgc ggactgggac tgggatactt gctgcaaatg ctcgtgctac
241 ctgccctggc cctgctcagc gccagcggca ctggctccgc cgcccaagat gatgactttt
301 ttcatgaact cccagaaact tttccttctg atccacctga gcctctgcca catttcctta
361 ttgagcctga agaagcttat attgtgaaga ataagcctgt gaacctgtac tgtaaagcaa
421 gccctgccac ccagatctat ttcaagtgta atagcgaatg ggttcatcag aaggaccaca
481 tagtagatga aagagtagat gaaacttccg gtctcattgt ccgggaagtg agcattgaga
541 tttcgcgcca gcaagtggaa gaactctttg gacctgaaga ttactggtgc cagtgtgtgg
601 cctggagctc cgcgggtacc acaaagagcc ggaaggcgta tgtgcgcatt gcatatctac
661 ggaagacatt tgagcaggaa cccctaggaa aggaagtgtc tttggaacag gaagtcttac
721 tccagtgtcg accacctgaa gggatcccag tggctgaggt ggaatggttg aaaaatgaag
781 acataattga tcccgttgaa gatcggaatt tttatattac tattgatcac aacctcatca
841 taaagcaggc ccgactctct gatactgcaa attacacctg tgttgccaaa aacattgttg
901 ccaagaggaa aagtacaact gccactgtca tagtctatgt caacggtggc tggtccacct
961 ggacggagtg gtctgtgtgt aacagccgct gtggacgagg gtatcagaaa cgtacaagga
1021 cttgtaccaa cccggcacca ctcaatgggg gtgccttctg tgaagggcag agtgtgcaga
1081 aaatagcctg tactacgtta tgcccagtgg atggcaggtg gacgccatgg agcaagtggt
1141 ctacttgtgg aactgagtgc acccactggc gcaggaggga gtgcacggcg ccagccccca
1201 agaatggagg caaggactgc gacggcctcg tcttgcaatc caagaactgc actgatgggc
1261 tttgcatgca gactgctcct gattcagatg atgttgctct ctatgttggg attgtgatag
1321 cagtgatcgt ttgcctggcg atctctgtag ttgtggcctt gtttgtgtat cggaagaatc
1381 atcgtgactt tgagtcagat attattgact cttcggcact caatgggggc tttcagcctg
1441 tgaacatcaa ggcagcaaga caagatctgc tggctgtacc cccagacctc acgtcagctg
1501 cagccatgta cagaggacct gtctatgccc tgcatgacgt ctcagacaaa atcccaatga
1561 ccaactctcc aattctggat ccactgccca acctgaaaat caaagtgtac aacacctcag
1621 gtgctgtcac cccccaagat gacctctctg agtttacgtc caagctgtcc cctcagatga
1681 cccagtcgtt gttggagaat gaagccctca gcctgaagaa ccagagtcta gcaaggcaga
1741 ctgatccatc ctgtaccgca tttggcagct tcaactcgct gggaggtcac cttattgttc
1801 ccaattcagg agtcagcttg ctgattcccg ctggggccat tccccaaggg agagtctacg
1861 aaatgtatgt gactgtacac aggaaagaaa ctatgaggcc acccatggat gactctcaga
1921 cacttttgac ccctgtggtg agctgtgggc ccccaggagc tctgctcacc cgcccagtcg
1981 tcctcactat gcatcactgc gcagacccca ataccgagga ctggagaata ctgctcaaga
2041 accaggcagc acagggacag tgggaggatg tggtggtggt cggggaggaa aacttcacca
2101 ccccctgcta cattcagctg gatgcagagg cctgccacat cctcacagag aacctcagca
2161 cctacgccct ggtaggacat tccaccacca aagcggctgc gaagcgcctc aagctggcca
2221 tctttgggcc cctgtgctgc tcctcgctgg agtacagcat ccgagtctac tgtctggatg
2281 acacccagga tgccctgaag gaaattttac atcttgagag acagacggga ggacagctcc
2341 tagaagaacc taaggctctt cattttaaag gcagcaccca caacctgcgc ctgtcaattc
2401 acgatatcgc ccattccctc tggaagagca aattgctggc taaatatcag gaaattccat
2461 tttaccatgt ttggagtgga tctcaaagaa acctgcactg caccttcact ctggaaagat
2521 ttagcctgaa cacagtggag ctggtttgca aactctgtgt gcggcaggtg gaaggagaag
2581 ggcagatctt ccagctcaac tgcaccgtgt cagaggaacc tactggcatc gatttgccgc
2641 tgctggatcc tgcgagcacc atcaccacgg tcacggggcc cagtgctttc agcatccctc
2701 tccctatccg gcagaagctc tgtagcagcc tggatgcccc ccagacgaga ggccatgact
2761 ggaggatgct ggcccataag ctgaacctgg acaggtactt gaattacttt gccaccaaat
2821 ccagcccaac tggcgtaatc ctggatcttt gggaagcaca gaacttccca gatggaaacc
2881 tgagcatgct ggcagctgtc ttggaagaaa tgggaagaca tgaaacggtg gtgtccttag
2941 cagcagaagg gcagtattaa ccaccatgct ggaaggggaa atgaaggaca aaaatgcaca
3001 gggagtctgt ggccgtccag gtgaatcaca gctgaggagg aaatccagat gagaccaatg
3061 cacttcacag gcaagactgc agcaggagcc agaaggaaaa cagatacaac tgcccatgta
3121 catgcccact ttactcggac atcatcacgg gagttaagaa aaattgtgta aatttgtacc
3181 ttgaatttag ctatcaacct aattttcctc ttagttgggc tgtatgctgt gtggtacagg
3241 atcttacagt ttcctaggaa acgcttttta ttgctatcca gatatatgga taaactttct
3301 taac
//