LOCUS AK290491 2661 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76657 partial cds, highly similar to Homo
sapiens PHD finger protein 3 (PHF3), mRNA.
ACCESSION AK290491
VERSION AK290491.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2661)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2661
/clone="FCBBF3013866"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000423288"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 54..>2661
/codon_start=1
/note="ighly similar to Homo sapiens PHD finger protein 3
(PHF3), mRNA"
/protein_id="BAF83180.1"
/transl_table=1
/translation="MDIVDTFNHLIPTEHLDDALFLGSNLENEVCEDFSASQNVLEDS
LKNMLSDKDPMLGSASNQFCLPVLDSNDPNFQMPCSTVVGLDDIMDEGVVKESGNDTI
DEEELILPNRNLRDKVEENSVRSPRKSPRLMAQEQVRSLRQSTIAKRSNAAPLSNTKK
ASGKTVSTAKAGVKQPERSQVKEEVCMSLKPEYHKENRRCSRNSGQIEVVPEVSVSSS
HSSVSSCLEMKDEDGLDSKHKCNNPGEIDVPSHELNCSLLSETCVTIGEKKNEALMEC
KAKPVGSPLFKFSDKEEHEQNDSISGKTGETVVEEMIATRKVEQDSKETVKLSHEDDH
ILEDAGSSDISSDAACTNPNKTENSLVGLPSCVDEVTECNSELKDTMGIADKTENTLE
RNKIEPLGYCEDAESNRQLESTEFNKSNLEVVDTSTFGPESNILENAICDVPDQNSKQ
LNAIESTKIESHETANLQDDRNSQSSSVSYLESKSVKSKHTKPVIHSKQNMTTDAPKK
IVAAKYEVIHSKTKVNVKSVKRNTDVPESQQNFHRPVKVRKKQIDKEPKIQSCNSGVK
SVKNQAHSVLKKTLQDQTLVQIFKPLTHSLSDKSHAHPGCLKEPHHPAQTGHVSHSSQ
KQCHKPQQQAPAMKTNSHVKEGLEHPGVEHFKEEDKLKLKKPEKNLQPRQRRSSKSFS
LDEPPLFIPDNIATIRREGSDHSSSFESKYMWTPSKQCGFCKKPHGNRFMVGCGRCDD
WFHGDCVGLSLSQAQQMGEEDKEYVCVKCCAEEDKKTEILDPDTLENQATVEFHSGDK
TMECEKLGLSKHTTNDRTKYIDDTVKHKVKILKRESGEGRNSSDCRDNEIKKWQLAPL
RKMGQPVLPRRSS"
BASE COUNT 960 a 446 c 585 g 670 t
ORIGIN
1 agtggtagcg ctcgtctggc ggagctgggg ctgaaagaca cacagaagtc ttcatggata
61 tagttgatac atttaatcat ttaattccta ctgaacactt agatgatgcc ctatttctag
121 gatccaacct ggagaatgaa gtctgtgagg attttagtgc aagtcaaaat gtcttagagg
181 actcgctgaa gaacatgctc agcgataagg atcctatgct aggatctgca agtaaccagt
241 tctgtttgcc tgttttggat agcaatgatc ccaatttcca gatgccttgt tcaacagttg
301 ttggtcttga cgatattatg gatgaaggag ttgttaaaga aagtggcaat gataccattg
361 atgaagaaga actgatttta cctaacagga acttaaggga caaggtagaa gaaaattcag
421 tgagatctcc aagaaaatca cctcgtttaa tggcacaaga acaagtaaga agtttgcgac
481 agagcactat tgccaagcgt tcaaatgcag caccattaag taacacaaaa aaagcatctg
541 ggaagactgt atctactgct aaagcaggag tgaaacaacc agaaaggagt caggttaaag
601 aagaagtatg tatgtcactg aaacctgagt accataagga gaatagaagg tgcagccgaa
661 atagcggaca aattgaagtg gtacctgaag tatcagtgtc ttcaagtcat tcttcagtgt
721 catcttgtct tgaaatgaag gatgaagatg gattagattc taagcataag tgtaataatc
781 cgggagaaat agatgtgcca tctcatgaat taaattgttc acttctttca gagacttgtg
841 ttactattgg agaaaagaaa aatgaagctt tgatggaatg taaagccaag cctgttggta
901 gtccattgtt taagttttca gataaagaag aacatgaaca aaatgattcc atttcaggta
961 aaacgggtga gactgttgtt gaagaaatga tagcaacaag aaaagttgaa caagattcaa
1021 aggagacagt aaaattatcc catgaagatg accatattct tgaggacgct ggatcttctg
1081 atatttctag tgatgctgct tgtacaaatc caaataagac agaaaacagc cttgtaggtt
1141 tgcctagttg tgtagatgaa gtgactgaat gtaattcgga attgaaggat accatgggta
1201 ttgctgataa aactgagaac acccttgaaa gaaataaaat tgaaccgttg ggttattgtg
1261 aagatgcgga gtctaatagg cagttggaga gcactgagtt taataaatca aacttagagg
1321 tggttgatac tagtactttt ggaccggaaa gtaatatctt ggaaaatgct atttgtgacg
1381 tgcctgacca aaattcaaaa cagttgaatg ctatagaaag tactaaaata gagtcccatg
1441 aaacagcaaa ccttcaggat gacagaaaca gccagtcaag tagcgtttct tacttagagt
1501 caaaaagtgt aaaatccaaa catacaaaac ctgtaattca ttctaagcaa aacatgacca
1561 cagatgctcc gaagaaaatt gttgcagcaa agtatgaagt aatacatagc aaaactaaag
1621 ttaatgtcaa aagtgtgaaa cgaaatactg atgtaccaga atctcagcaa aattttcata
1681 ggccagtcaa agtcagaaaa aaacaaattg ataaggagcc aaagattcag agttgcaatt
1741 ctggggttaa atctgtgaaa aaccaagctc attctgtact gaaaaaaaca ttacaggatc
1801 aaactttagt acaaattttc aagcccttaa ctcattcttt gagtgataag tcacacgctc
1861 atcctggttg cttgaaagaa cctcatcatc ctgcacaaac tggacatgta tcacattcta
1921 gccagaaaca gtgtcataag cctcagcaac aggccccagc aatgaaaacc aatagtcacg
1981 tgaaggaagg gcttgaacac ccaggcgttg agcattttaa ggaagaggat aaactgaaac
2041 tgaaaaaacc tgagaagaac ctacaacccc gccaaagaag aagcagcaaa agtttttctt
2101 tagatgagcc accattgttc attccagata acatagctac cataagaaga gaaggctctg
2161 atcatagctc ctcatttgaa agcaaatata tgtggactcc cagcaagcag tgtgggtttt
2221 gcaaaaaacc acatggcaac aggtttatgg ttggctgtgg gagatgtgat gactggtttc
2281 atggtgattg tgttgggtta agtctttctc aagcacagca gatgggcgag gaagacaaag
2341 aatatgtctg tgtaaaatgt tgtgctgaag aagacaaaaa gactgaaata ctagatccag
2401 atactttgga aaaccaagct acagttgaat tccatagtgg agataaaaca atggagtgtg
2461 aaaagcttgg attatcaaaa cacacaacaa atgatagaac caaatatata gatgatacag
2521 tgaagcacaa ggtcaaaatt ttaaaacggg agtctggtga aggcagaaat tcatcagact
2581 gtagagataa tgaaattaaa aaatggcagc tagctcctct tcgtaagatg ggacaaccag
2641 ttttacctcg gagatcctca g
//