LOCUS AK290471 2583 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77750 complete cds, highly similar to Homo
sapiens PHD finger protein 15 (PHF15), mRNA.
ACCESSION AK290471
VERSION AK290471.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2583)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2583
/clone="FCBBF3006675"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000423268"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 54..2426
/codon_start=1
/note="highly similar to Homo sapiens PHD finger protein
15 (PHF15), mRNA"
/protein_id="BAF83160.1"
/transl_table=1
/translation="MEEKRRKYSISSDNSDTTDSHATSTSASRCSKLPSSTKSGWPRQ
NEKKPSEVFRTDLITAMKIPDSYQLSPDDYYILADPWRQEWEKGVQVPAGAEAIPEPV
VRILPPLEGPPAQASPSSTMLGEGSQPDWPGGSRYDLDEIDAYWLELINSELKEMERP
ELDELTLERVLEELETLCHQNMARAIETQEGLGIEYDEDVVCDVCRSPEGEDGNEMVF
CDKCNVCVHQACYGILKVPTGSWLCRTCALGVQPKCLLCPKRGGALKPTRSGTKWVHV
SCALWIPEVSIGCPEKMEPITKISHIPASRWALSCSLCKECTGTCIQCSMPSCVTAFH
VTCAFDHGLEMRTILADNDEVKFKSFCQEHSDGGPRNEPTSEPTEPSQAGEDLEKVTL
RKQRLQQLEEDFYELVGPAEVAERLDLAEALVDFIYQYWKLKRKANANQPLLTPKTDE
VDNLAQQEQDVLYRRLKLFTHLRQDLERVRNLCYMVTRRERTKHAICKLQEQIFHLQM
KLIEQDLCRGLSTSFPIDGTFFNSWLAQSVQITAENMAMSEWPLNNGHREDPAPGLLS
EELLQDEETLLSFMRDPSLRPGDPARKARGRTRLPAKKKPPPPPPQDGPGSRTTPDKA
PKKTWGQDAGSGKGGQGPPTRKPPRRTSSHLPSSPAAGDCPILATPESPPPLAPETPD
EAASVAADSDVQVPGPAASPKPLGRLRPPRESKVTRRLPGARPDAGMGPPSAVAERPK
VSLHFDTETDGYFSDGEMSDSDVEAEDGGVQRGPREAGAEEVVRMGVLAS"
BASE COUNT 582 a 780 c 782 g 439 t
ORIGIN
1 agtacagtgc ggggaggctg agaggggcgc acgcaacaac aacttttgga aggatggaag
61 agaagaggcg aaaatactcc atcagcagtg acaactctga caccactgac agtcatgcga
121 catctacatc cgcatcaaga tgctccaaac tgcccagcag caccaagtcg ggctggcccc
181 gacagaacga aaagaagccc tccgaggttt tccggacaga cttgatcaca gccatgaaga
241 tcccggactc ataccagctc agcccggatg actactacat cctggcagac ccatggcgac
301 aggaatggga gaaaggtgtg caggtgcctg ccggggcaga ggccatccca gagcccgtgg
361 tgaggatcct cccaccactg gaaggccccc ctgcccaggc atccccgagc agcaccatgc
421 ttggtgaggg ctcccagcct gattggccag ggggcagccg ctatgacttg gacgagattg
481 atgcctactg gctggagctc atcaactcgg agcttaagga gatggagagg ccggagctgg
541 acgagctgac attagagcgt gtgctggagg agctggagac cctgtgccac cagaatatgg
601 ccagggccat tgagacgcag gaggggctgg gcatcgagta cgacgaggat gttgtctgcg
661 acgtgtgtcg ctctcctgag ggcgaggatg gcaacgagat ggtcttctgt gacaagtgca
721 acgtctgtgt gcatcaggca tgctacggga tcctcaaggt gcccacgggc agctggctgt
781 gccggacgtg tgccctgggt gtccagccaa agtgcctgct ctgccccaag cggggaggag
841 ccttgaagcc cactagaagt gggaccaagt gggtgcatgt cagctgtgcc ctatggattc
901 ctgaggtcag catcggctgc ccagagaaga tggagcccat caccaagatc tcgcatatcc
961 cagccagccg ctgggctctg tcctgcagcc tctgcaagga atgcacaggc acctgcatcc
1021 agtgttccat gccttcctgc gtcacagcgt tccatgtcac atgcgccttt gaccacggcc
1081 tggaaatgcg gactatatta gcagacaacg atgaggtcaa gttcaagtca ttctgccagg
1141 agcacagtga cgggggccca cgtaatgagc ccacatctga gcccacggaa cccagccagg
1201 ctggcgagga cctggaaaag gtgaccctgc gcaagcagcg gctgcagcag ctagaggagg
1261 acttctacga gctggtgggg ccggctgagg tggctgagcg gctggacctg gctgaggcac
1321 tggtcgactt catctaccag tactggaagc tgaagaggaa agccaatgcc aaccagccgc
1381 tgctgacccc caagaccgac gaggtggaca acctggccca gcaggagcag gacgtcctct
1441 accgccgcct gaagctcttc acccatctgc ggcaggacct agagagggtt agaaatctgt
1501 gctacatggt gacaaggcgc gagagaacga aacacgccat ctgcaaactc caggagcaga
1561 tattccacct gcagatgaaa cttattgaac aggatctgtg tcgaggcctg tccacctcat
1621 tccccatcga tggcaccttc ttcaacagct ggctggcaca gtcggtgcag atcacagcag
1681 agaacatggc catgagcgag tggccactga acaatgggca ccgcgaggac cctgctccag
1741 ggctgctgtc agaggaactg ctgcaggacg aggagacact gctcagcttc atgcgggacc
1801 cctcgctgcg acctggtgac cctgctagga aggcccgagg ccgcacccgc ctgcctgcca
1861 agaagaaacc accaccacca ccaccgcagg acgggcctgg ttcacggacg actccagaca
1921 aagcccccaa gaagacctgg ggccaggatg caggcagtgg caaggggggt caagggccac
1981 ctaccaggaa gccaccacgt cggacatctt ctcacttgcc gtccagccct gcagccgggg
2041 actgccccat cctagccacc cctgaaagcc ccccgccact ggcccctgag accccggacg
2101 aggcagcctc agtagctgct gactcagatg tccaagtgcc tggccctgca gcaagcccta
2161 agcctttggg ccggctccgg ccaccccgcg agagcaaggt aacccggaga ttgccgggtg
2221 ccaggcctga tgctgggatg ggaccacctt cagctgtggc tgagaggccc aaggtcagcc
2281 tgcattttga cactgagact gatggctact tctctgatgg ggagatgagc gactcagatg
2341 tagaggccga ggacggtggg gtgcagcggg gtccccggga ggcaggggca gaggaggtgg
2401 tccgcatggg cgtactggcc tcctaactca cccccttccc tgtcccaggc cctgccctgg
2461 tccccccaca aggcctcagc ccagtcacaa ctgccatttc cagtctctgc tgagtgtccc
2521 agaccctcga ggctgccact ccgtcgtggt tttattttta atatagagag agttttgaat
2581 tct
//