LOCUS AK290468 2701 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77059 partial cds, highly similar to Homo
sapiens AF4/FMR2 family, member 3 (AFF3), transcript variant 1,
mRNA.
ACCESSION AK290468
VERSION AK290468.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2701)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2701
/clone="FCBBF3005658"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000423265"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 95..>2701
/codon_start=1
/note="ighly similar to Homo sapiens AF4/FMR2 family,
member 3 (AFF3), transcript variant 1, mRNA"
/protein_id="BAF83157.1"
/transl_table=1
/translation="MDSFDLALLQEWDLESLCVYEPDRNALRRKERERRNQETQQDDG
TFNSSYSLFSEPYKTNKGDELSNRIQNTLGNYDEMKDFLTDRSNQSHLVGVPKPGVPQ
TPVNKIDEHFVADSRAQNQPSSICSTTTSTPAAVPVQQSKRGTMGWQKAGHPPSDGQQ
RATQQGSLRTLLGDGVGRQQPRAKQVCNVEVGLQTQERPPAMAAKHSSSGHCVQNFPP
SLASKPSLVQQKPTAYVRPMDGQDQAPDESPKLKSSSETSVHCTSYRGVPASKPEPAR
AKAKLSKFSIPKQGEESRSGETNSCVEEIIREMTWLPPLSAIQAPGKVEPTKFPFPNK
DSQLVSPGHNNPKKGDAEPESPDNGTSNTSMLEDDLKLSSDEEENEQQAAQRTALRAL
SDSAAVQQPNCRTSVPSSKGSSSSSSSGSSSSSSDSESSSGSDSETESSSSESEGSKP
PHFSSPEAEPASSNKWQLDKWLNKVNPHKPPILIQNESHGSESNQYYNPVKEDVQDCG
KVPDVCQPSLREKEIKSTCKEEQRPRTANKAPGSKGVKQKSPPAAVAVAVSAAAPPPA
VPCAPAENAPAPARRSAGKKPTRRTERTSAGDGANCHRPEEPAAADALGTSVVVPPEP
TKTRPCGNNRASHRKELRSSVTCEKRRTRGLSRIVPKSKEFIETESSSSSSSSDSDLE
SEQEEYPLSKAQTVAASASSGNDQRLKEAAANGGSGPRAPVGSINARTTSDIAKELEE
QFYTLVPFGRNELLSPLKDSDEIRSLWVKIDLTLLSRIPEHLPQEPGVLSAPATKDSE
SAPPSHTSDTPAEKALPKSKRKRKCDNEDDYREIKKSQGEKDSSSRLATSTSNTLSAN
HCNMNINSVAIPI"
BASE COUNT 715 a 817 c 749 g 420 t
ORIGIN
1 gagtgtgcct gcgcgcaagc cggggagcgg cgcgcgggcg gcccgagcct cggcggcggc
61 ggtagcggcg gcggcgacgc tgacacctcc caccatggac agcttcgact tagccctgct
121 ccaggaatgg gacctcgagt cactgtgtgt ctatgaacca gatagaaatg cattacggag
181 gaaagaacga gaaagaagaa atcaagaaac tcaacaggat gatggcacgt ttaattctag
241 ttactctctc ttcagtgagc cctacaagac taacaagggg gatgaactct ccaaccggat
301 ccagaacact ttaggcaatt atgatgaaat gaaagacttt ttaactgata gatccaatca
361 gagtcatctc gttggagttc ccaaacctgg ggttcctcag actcctgtga acaagatcga
421 tgaacatttt gttgcagatt caagagccca gaaccagccc tcgtctatct gtagcactac
481 aacttccaca ccagcagctg tccccgtgca gcagagtaag agaggcacta tgggctggca
541 gaaggctggg cacccaccct ctgacggcca acagagagca acacaacagg gctctctcag
601 gaccttgctt ggagatggtg ttggcagaca gcagcctcgg gccaaacaag tgtgcaatgt
661 ggaggtgggc cttcagaccc aggagaggcc acctgccatg gcggccaagc acagcagcag
721 cggacactgt gttcagaact ttcctccatc cctagcttca aaacccagcc tggtccagca
781 gaaaccgacc gcgtatgtga ggccgatgga cggccaagat caggcccctg atgagtctcc
841 taagctgaag tcgtcttcgg aaaccagcgt gcactgcaca tcatacaggg gagtccctgc
901 cagcaagccg gagcctgcca gagccaaggc caagctctcc aagttcagca tccccaagca
961 gggggaggag agtagatctg gagaaaccaa cagctgtgtt gaagaaataa tccgggagat
1021 gacctggctt ccaccacttt ctgctattca agcacccggc aaagtggaac caaccaaatt
1081 tccatttcca aataaggact ctcagcttgt atcccctgga cacaataatc caaagaaagg
1141 tgatgcagag ccagagagtc cagacaatgg cacatcgaat acatcaatgc tggaagatga
1201 ccttaagcta agcagtgatg aagaggagaa tgaacagcag gcagctcaga gaacggctct
1261 ccgcgctctc tctgacagcg ccgcggtcca gcagcccaac tgcagaacct cggtgccttc
1321 cagcaagggc agcagcagca gcagcagcag cggcagcagc agctcctcca gcgactcaga
1381 gagcagctcc ggatctgact cggagaccga gagcagctcc agcgagagtg agggcagcaa
1441 gcccccccac ttctccagcc ccgaggctga accggcatcc tctaacaagt ggcagctgga
1501 taaatggcta aacaaagtta atccccacaa gcctcctatt ctgatccaaa atgaaagcca
1561 cgggtcagag agcaatcagt actacaaccc ggtgaaagag gacgtccagg actgtgggaa
1621 agtccccgac gtttgccagc ccagcctgag agagaaggag atcaagagca cttgcaagga
1681 ggagcaaagg ccaaggacag ccaacaaggc ccctgggagt aaaggcgtga agcagaagtc
1741 cccgcccgcg gccgtggccg tggcggtgag cgcagccgcc ccgccacccg cagtgccctg
1801 tgcgcccgcg gagaacgcgc ccgcgcctgc ccggaggtcc gcgggcaaga agcccaccag
1861 gcgcaccgag aggacctcag ccggggacgg cgccaactgc caccggcccg aggagcccgc
1921 ggccgcggac gcgctgggga cgagcgtggt ggtccccccg gagcccacca aaaccaggcc
1981 ctgtggcaac aacagagcga gccaccgcaa ggagctgcgc tcctccgtga cctgcgagaa
2041 gcgccgcacg cgggggctaa gcaggatcgt ccccaaatcc aaggagttca ttgagacaga
2101 gtcgtcatct tcatcctcct cctcggactc cgacctggag tccgagcagg aggagtaccc
2161 tctgtccaaa gcacagaccg tggctgcctc tgcctcctcc gggaatgatc agaggctgaa
2221 ggaggccgct gccaacgggg gcagtggtcc tagggcccct gtaggctcca tcaacgccag
2281 gaccaccagt gacatcgcca aggagctgga ggagcagttc tacacactgg tcccctttgg
2341 ccggaacgaa cttctctccc ctctaaagga cagtgatgag atcaggtctc tctgggtcaa
2401 aatcgacctg accctcctgt ccaggatccc agaacacctg ccccaggagc caggggtatt
2461 gagcgcccct gccaccaagg actctgagag cgcaccgccc agccacacct cggacacacc
2521 tgcagaaaag gctttgccaa aatccaagag gaaacgcaag tgtgacaacg aagacgacta
2581 cagggagatc aagaagtccc agggagagaa agacagctct tcaagactgg ccacctccac
2641 cagtaatact ttgtctgcaa accactgcaa catgaacatc aacagtgtgg caataccaat
2701 a
//