LOCUS AK290466 1733 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78208 complete cds, highly similar to Homo
sapiens apolipoprotein L, 4 (APOL4), transcript variant a, mRNA.
ACCESSION AK290466
VERSION AK290466.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1733)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1733
/clone="FCBBF3005180"
/clone_lib="FCBBF3"
/db_xref="H-InvDB:HIT000423263"
/db_xref="taxon:9606"
/dev_stage="fetal"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="brain"
CDS 409..1455
/codon_start=1
/note="highly similar to Homo sapiens apolipoprotein L, 4
(APOL4), transcript variant a, mRNA"
/protein_id="BAF83155.1"
/transl_table=1
/translation="MGSWVQLITSVGVQQNHPGWTVAGQFQEKKRFTEEVIEYFQKKV
SPVHLKILLTSDEAWKRFVRVAELPREEADALYEALKNLTPYVAIEDKDMQQKEQQFR
EWFLKEFPQIRWKIQESIERLRVIANEIEKVHRGCVIANVVSGSTGILSVIGVMLAPF
TAGLSLSITAAGVGLGIASATAGIASSIVENTYTRSAELTASRLTATSTDQLEALRDI
LHDITPNVLSFALDFDEATKMIANDVHTLRRSKATVGRPLIAWRYVPINVVETLRTRG
APTRIVRKVARNLGKATSGVLVVLDVVNLVQDSLDLHKGEKSESAELLRQWAQELEGN
LNELTHIHQSLKAG"
BASE COUNT 458 a 402 c 466 g 407 t
ORIGIN
1 attatatagg tgcacagctg gaggtgagat ccacacagct cagaccagct ggatcttgct
61 cagtctctgt cagaggaaga tcccttggag gaggccccgc agcgacatgg agggagctgc
121 tttgctgaaa gtctttgtcc tctgcatctg gtgagcttgg ctcagagccc tgaggtggga
181 gggagggctc cctgtctggg ctgcacaatt gggcagggct tgggctgggc caggagccat
241 gtgggttttt ctaggaacca aaatcacttc ccggaattga ccaactggta gactcgccta
301 gaggggaagc attgtgtcct agttgaggct aacagtcagt atccagcctc aacattcagc
361 agaggcccca gatcagcgtc tgagccaggc caacaatgac caaggaggat gggatcctgg
421 gtgcagctca tcacaagcgt cggggtgcag caaaaccatc caggctggac agtggctgga
481 cagttccaag aaaagaaacg cttcactgaa gaagtcattg aatacttcca gaagaaagtt
541 agcccagtgc atctgaaaat cctgctgact agcgatgaag cctggaagag attcgtgcgt
601 gtggctgaat tgcccaggga agaagcagat gctctctatg aagctctgaa gaatcttaca
661 ccatatgtgg ctattgagga caaagacatg cagcaaaaag aacagcagtt tagggagtgg
721 tttttgaaag agtttcctca aatcagatgg aagattcagg agtccataga aaggcttcgt
781 gtcattgcaa atgagattga aaaggtccac agaggctgcg tcatcgccaa tgtggtgtct
841 ggctccactg gcatcctgtc tgtcattggc gttatgttgg caccatttac agcagggctg
901 agcctgagca ttactgcagc tggggtaggg ctgggaatag catctgccac ggctgggatc
961 gcctccagca tcgtggagaa cacatacaca aggtcagcag aactcacagc cagcaggctg
1021 actgcaacca gcactgacca attggaggca ttaagggaca ttctgcatga catcacaccc
1081 aatgtgcttt cctttgcact tgattttgac gaagccacaa aaatgattgc gaatgatgtc
1141 catacactca ggagatctaa agccactgtt ggacgccctt tgattgcttg gcgatatgta
1201 cctataaatg ttgttgagac actgagaaca cgtggggccc ccacccggat agtgagaaaa
1261 gtagcccgga acctgggcaa ggccacttca ggtgtcctcg ttgtgctgga tgtagtcaac
1321 cttgtgcaag actcactgga cttgcacaag ggggaaaaat ccgagtctgc tgagttgctg
1381 aggcagtggg ctcaggagct ggaggggaat ctcaatgagc tcacccatat ccatcagagt
1441 ctaaaagcag gctaggccca attgttgcgg gaagtcaggg accccaaacg gagggactgg
1501 ctgaagccat ggcagaagaa cgtggattgt gaagatttca tggacattta ttagttcccc
1561 aaattaatac ttttataatt tcctatgcct gtctttaccg caatctctaa acacaaattg
1621 tgaagatttc atggacactt atcacttccc caatcaatac ccttgtgatt tcttatgcct
1681 gtctttactt taatctccta atcctgtcag ctgaggagga tgtatgtcac ctc
//