LOCUS AK290437 3043 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76782 complete cds, highly similar to Homo
sapiens RAD54 homolog B (S. cerevisiae) (RAD54B), transcript
variant 1, mRNA.
ACCESSION AK290437
VERSION AK290437.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3043)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3043
/cell_type="normal dermal fibroblasts (Neonatal Skin)
(NHDF2564)"
/clone="DFNES2007121"
/clone_lib="DFNES2"
/db_xref="H-InvDB:HIT000423234"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, normal dermal fibroblasts"
/organism="Homo sapiens"
CDS 102..2834
/codon_start=1
/note="highly similar to Homo sapiens RAD54 homolog B (S.
cerevisiae) (RAD54B), transcript variant 1, mRNA"
/protein_id="BAF83126.1"
/transl_table=1
/translation="MRRSAAPSQLQGNSFKKPKFIPPGRSNPGLNEEITKLNPDIKLF
EGVAINNTFLPSQNDLRICSLNLPSEESTREINNRDNCSGKYCFEAPTLATLDPPHTV
HSAPKEVAVSKEQEEKSDSLVKYFSVVWCKPSKKKHKKWEGDAVLIVKGKSFILKNLE
GKDIGRGIGYKFKELEKIEEGQTLMICGKEIEVMGVISSDDFSSGRCFQLGGGSTAIS
HSSQVARKCFSNPFKSVCKPSSKENRQNDFQNCKPRHDPYTPNSLVMPRPDKNHQWVF
NKNCFPLVDVVIDPYLVYHLRPHQKEGIIFLYECVMGMRMNGRCGAILADEMGLGKTL
QCISLIWTLQCQGPYGGKPVIKKTLIVTPGSLVNNWKKEFQKWLGSERIKIFTVDQDH
KVEEFIKSIFYSVLIISYEMLLRSLDQIKNIKFDLLICDEGHRLKNSAIKTTTALISL
SCEKRIILTGTPIQNDLQEFFALIDFVNPGILGSLSSYRKIYEEPIILSREPSASEEE
KELGERRAAELTCLTGLFILRRTQEIINKYLPPKIENVVFCRPGALQIELYRKLLNSQ
VVRFCLQGLLENSPHLICIGALKKLCNHPCLLFNSIKEKECSSTCDKNEEKSLYKGLL
SVFPADYNPLLFTEKESGKLQVLSKLLAVIHELRPTEKVVLVSNYTQTLNILQEVCKR
HGYAYTRLDGQTPISQRQQIVDGFNSQHSSFFIFLLSSKAGGVGLNLIGGSHLILYDI
DWNPATDIQAMSRVWRDGQKYPVHIYRLLTTGTIEEKIYQRQISKQGLCGAVVDLTKT
SEHIQFSVEELKNLFTLHESSDCVTHDLLDCECTGEEVHTGDSLEKFIVSRDCQLGPH
HQKSNSLKPLSMSQLKQWKHFSGDHLNLTDPFLERITENVSFIFQNITTQATGT"
BASE COUNT 1004 a 527 c 609 g 903 t
ORIGIN
1 cttgagcttc tccggcggcg aggggatagc tggttaccag aaggacttct ttgcagggcc
61 agtggtttct gtcagatttt cgccggtcac gactgctgaa tatgagacga tctgcagcac
121 caagtcagtt gcaggggaat tccttcaaaa aaccaaaatt tatacctcca ggaagaagta
181 atccaggtct gaatgaagag attacaaaac tgaatccaga tataaaatta tttgagggtg
241 ttgcaattaa taacaccttt ctcccgtcac aaaatgatct tagaatatgc agtttaaatc
301 tgcctagtga agaaagtact agagaaatca ataacagaga taattgcagt ggaaaatatt
361 gttttgaagc acctacactg gcaacattag atccacctca tacagttcat tcggctccta
421 aagaagtagc agtgtccaag gaacaagaag agaaatctga tagcctagtt aaatatttca
481 gtgttgtttg gtgtaagcct tcaaagaaaa aacataaaaa gtgggaaggt gatgctgttc
541 ttattgtaaa aggaaagtca tttatattaa agaatttgga aggcaaagac attggaagag
601 gcattggtta taaattcaaa gagcttgaaa agattgaaga gggccaaaca ctgatgattt
661 gtggaaaaga aatagaagtc atgggtgtaa tctcttcaga tgacttcagc agtggcaggt
721 gttttcagct tggaggagga agtactgcta tctcgcattc ttctcaggtt gccaggaaat
781 gtttctctaa ccctttcaaa agtgtttgta aaccaagttc aaaggaaaat agacagaatg
841 atttccaaaa ttgcaaacca cgccatgacc catatacgcc aaattccctc gttatgccac
901 gaccagataa gaatcaccag tgggtattca ataagaactg tttccctctt gtggatgtag
961 tgattgatcc ttaccttgta tatcatcttc gaccacatca gaaagaagga atcatattcc
1021 tttatgaatg tgtaatggga atgagaatga atggcagatg tggagctatt cttgctgatg
1081 aaatgggttt agggaagaca ttgcaatgta tttcgctcat ctggaccctg cagtgtcagg
1141 gaccctatgg aggcaagcca gtaataaaga agacactaat tgtcacacct ggaagcttgg
1201 tgaataattg gaagaaagaa tttcaaaaat ggctaggaag tgaaaggatc aagatattta
1261 ctgttgatca ggaccacaaa gttgaagaat tcatcaagtc tatattttat tctgttctta
1321 ttatcagtta tgaaatgtta cttcgttccc tggatcaaat taagaatata aaatttgatc
1381 ttctaatctg tgacgagggg catcgtttga agaacagtgc cattaagaca actacagccc
1441 tcattagcct ttcttgtgag aaaagaataa ttctaactgg tactccaatt cagaatgatc
1501 tgcaagaatt ttttgcatta attgattttg taaatccagg aatattaggc tctttgtcat
1561 cttataggaa aatatatgaa gaacccatca ttttatcgag agaaccttct gcttctgagg
1621 aagaaaagga gttaggagaa agaagagcag ctgaacttac ttgcctcact ggactcttta
1681 tccttagaag aacccaagaa attataaata aatatctccc acctaaaata gagaatgttg
1741 tcttttgccg accaggagca ctacagattg agctttatcg aaagctgtta aattctcagg
1801 ttgtcaggtt ctgccttcaa gggttgttgg aaaatagtcc ccatctaata tgtataggag
1861 ctcttaaaaa actgtgcaat cacccctgcc ttttgttcaa ctctataaag gaaaaggaat
1921 gtagctcaac ttgtgataaa aatgaagaaa agagtctata caaaggcttg ctaagtgtgt
1981 ttcctgctga ctacaaccct ctcctgttta ctgaaaagga gtcaggaaaa ctacaggtgt
2041 tgtccaagct cttagcggtt atccacgaac ttcgacctac tgaaaaggtg gtgttggtat
2101 ccaactatac acaaaccttg aacattttac aagaagtatg taagcgtcat ggatatgctt
2161 atacaagact tgatggacaa acaccaatct ctcaaaggca gcagattgtt gatggcttta
2221 acagtcaaca ctcttctttt tttatttttt tgttaagttc aaaagctggt ggtgtaggac
2281 ttaacctcat tggaggatct cacttaattc tctatgacat tgattggaat ccggccactg
2341 acattcaggc aatgtctaga gtatggagag atggtcagaa atatcctgta catatttaca
2401 gactcctaac tacaggtaca atagaagaaa agatctatca aaggcagatc agtaagcaag
2461 gtctttgtgg ggcagttgtc gacctcacca agacatctga acatattcag ttttcagtag
2521 aagaacttaa aaatttgttc acattacatg aaagttcaga ttgtgttact catgatctgc
2581 ttgactgtga gtgtacagga gaagaagttc atacaggtga ttcgttggaa aaattcattg
2641 tctctagaga ttgtcagctt ggtccacatc accagaaatc taactccctg aaacctcttt
2701 ctatgtccca gctgaagcaa tggaaacatt tttctggaga tcatttaaat cttacagatc
2761 cttttcttga aagaataaca gaaaatgtgt cattcatttt tcagaatata accactcaag
2821 ctactggcac atagtgaaag attacttctg acattccatt gctcttcttt tgaaaattag
2881 tatggtaatt aaatgtactt tttgaaaatt aatagaatta tttaaattac agtatatgtt
2941 gcaaaatata tcacctttga tacaatagtc aaaattgagt ggtttaatgt tttgtaaata
3001 ttaagtgttt aaatgaaaaa taaagatgtg cttatatcat tgt
//