LOCUS AK290416 2459 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75635 complete cds, highly similar to Homo
sapiens suppressor of var1, 3-like 1 (S. cerevisiae) (SUPV3L1),
mRNA.
ACCESSION AK290416
VERSION AK290416.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2459)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2459
/clone="D9OST2001922"
/clone_lib="D9OST2"
/db_xref="H-InvDB:HIT000423213"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="mRNA from CD34+ cells after 9-days ODF induction."
/note="primary culture, CD34+ cells"
/organism="Homo sapiens"
/tissue_type="cord blood"
CDS 43..2403
/codon_start=1
/note="highly similar to Homo sapiens suppressor of var1,
3-like 1 (S. cerevisiae) (SUPV3L1), mRNA"
/protein_id="BAF83105.1"
/transl_table=1
/translation="MSFSRALLWARLPAGRQAGHRAAICSALRPHFGPFPGVLGQVSV
LATASSSASGGSKIPNTSLFVPLTVKPQGPSADGDVGAELTRPLDKNEVKKVLDKFYK
RKEIQKLGADYGLDARLFHQAFISFRNYIMQSHSLDVDIHIVLNDICFGAAHADDLFP
FFLRHAKQIFPVLDCKDDLRKISDLRIPPNWYPDARAMQRKIIFHSGPTNSGKTYHAI
QKYFSAKSGVYCGPLKLLAHEIFEKSNAAGVPCDLVTGEERVTVQPNGKQASHVSCTV
EMCSVTTPYEVAVIDEIQMIRDPARGWAWTRALLGLCAEEVHLCGEPAAIDLVMELMY
TTGEEVEVRDYKRLTPISVLDHALESLDNLRPGDCIVCFSKNDIYSVSRQIEIRGLES
AVIYGSLPPGTKLAQAKKFNDPNDPCKILVATDAIGMGLNLSIRRIIFYSLIKPSINE
KGERELEPITTSQALQIAGRAGRFSSRFKEGEVTTMNHEDLSLLKEILKRPVDPIRAA
GLHPTAEQIEMFAYHLPDATLSNLIDIFVDFSQVDGQYFVCNMDDFKFSAELIQHIPL
SLRVRYVFCTAPINKKQPFVCSSLLQFARQYSRNEPLTFAWLRRYIKWPLLPPKNIKD
LMDLEAVHDVLDLYLWLSYRFMDMFPDASLIRDLQKELDGIIQDGVHNITKLIKMSET
HKLLNLEGFPSGSQSRLSGTLKSQARRTRGTKALGSKATEPPSPDAGELSLASRLVQQ
GLLTPDMLKQLEKEWMTQQTEHNKEKTESGTHPKGTRRKKKEPDSD"
BASE COUNT 674 a 540 c 578 g 667 t
ORIGIN
1 gtgtccgcgg ctgcgccaga cagtgtagaa cctgcggcct cgatgtcctt ctcccgtgcc
61 ctattgtggg ctcggctccc ggcggggcgc caggctggcc accgggcagc catctgctct
121 gcccttcgtc cccactttgg gccctttccc ggggttctgg ggcaagtttc tgtccttgcc
181 accgcctcct cctctgcctc cggtggctcc aaaataccaa acacgtcctt gttcgtgccc
241 ctgactgtga aacctcaggg ccccagcgcc gacggcgacg tcggggccga gctaacccgg
301 cctctggaca agaatgaagt aaagaaggtc ttagacaaat tttacaagag gaaagaaatt
361 cagaaactgg gtgctgatta tggacttgat gctcgtctct tccaccaagc tttcataagc
421 tttagaaatt atattatgca gtctcattcc ctggatgtgg acattcacat tgttttgaat
481 gatatttgct tcggtgcagc tcatgcggat gatttattcc catttttctt gagacatgcc
541 aaacaaatat ttcctgtgtt ggactgtaag gatgatctac gtaaaatcag tgacttaaga
601 ataccaccta actggtaccc agatgctaga gccatgcagc ggaagataat atttcattca
661 ggccccacaa acagtggaaa gacttatcac gcaatccaga aatacttctc agcaaagtct
721 ggagtgtatt gtggccctct aaaattactg gcacatgaga tcttcgaaaa gagtaatgct
781 gctggtgtgc catgtgactt ggtgacaggt gaagagcgtg tgacagttca gccaaatggg
841 aaacaggctt cacatgtttc ttgtacagtt gagatgtgca gtgttacaac tccttatgaa
901 gtggctgtaa ttgatgaaat tcaaatgatt agagatccag ccagaggatg ggcctggacc
961 agagcacttc taggactgtg tgctgaagag gttcatttgt gtggagaacc tgctgctatt
1021 gacctggtga tggagcttat gtacacaacg ggggaggaag tggaggttcg agactataag
1081 aggcttaccc ccatttctgt gctggaccat gcactagaat ctttagataa ccttcggcct
1141 ggggactgca ttgtctgttt tagcaagaat gatatttatt ctgtgagtcg gcagattgaa
1201 attcggggat tagaatcagc tgttatatat ggcagtctcc cacctgggac caaacttgct
1261 caagcaaaaa agtttaatga tcccaatgac ccatgcaaaa tcttggttgc tacagatgca
1321 attggcatgg gacttaattt gagcataagg agaattattt tttactccct tataaagccc
1381 agtatcaatg aaaagggaga gagagaacta gaaccaatca caacctctca agccctgcag
1441 attgctggca gagctggcag attcagctca cggtttaaag aaggagaggt tacaacaatg
1501 aatcatgaag atctcagttt attaaaggaa attttgaaga ggcctgtgga tcctataagg
1561 gcagctggtc ttcatccaac tgctgagcag attgaaatgt ttgcctacca tctccctgat
1621 gcaacactgt ccaatctcat tgatattttt gtagactttt cacaagttga tgggcagtat
1681 tttgtctgca atatggatga ttttaaattt tctgcagagt tgatccagca tattccacta
1741 agtctgcgag tgaggtatgt tttctgcaca gctcctatca acaagaagca gccttttgtg
1801 tgttcttcac tgttacagtt tgccaggcag tatagcagga atgagcccct gacctttgca
1861 tggttacgcc gatacatcaa atggccttta cttccaccta agaatattaa agacctcatg
1921 gatcttgaag ctgtccacga tgtcttggat ctttacttgt ggctaagcta ccgatttatg
1981 gatatgtttc cagatgccag ccttattcga gatctccaga aagaactaga tggtattatc
2041 caagatggtg tgcacaatat cactaaattg attaaaatgt ctgagacgca taagctgttg
2101 aatttggagg gctttccatc agggagccag tcacgattgt caggaacctt aaagagccaa
2161 gctagaagga cacgcggcac caaagctcta gggagtaaag ctactgagcc acccagcccc
2221 gatgcaggag agctgtccct tgcttccaga ttggtgcagc aaggactcct cactccagac
2281 atgctgaaac agctagaaaa agagtggatg acacaacaaa ctgaacacaa caaagaaaaa
2341 acagagtctg ggactcatcc aaaagggacg agaagaaaga agaaggaacc tgattcggac
2401 tagttttctg ttcctgtttt ttttttttta tttaattttg caaataaaaa tttattttg
//