LOCUS AK290379 2079 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76247 complete cds, highly similar to Homo
sapiens BRCA1 associated protein (BRAP), mRNA.
ACCESSION AK290379
VERSION AK290379.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2079)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2079
/clone="CTONG3006987"
/clone_lib="CTONG3"
/db_xref="H-InvDB:HIT000423176"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 145..1923
/codon_start=1
/note="highly similar to Homo sapiens BRCA1 associated
protein (BRAP), mRNA"
/protein_id="BAF83068.1"
/transl_table=1
/translation="MSVSLVVIRLELAEHSPVPAGFGFSAAAGEMSDEEIKKTTLASA
VACLEGKSPGEKVAIIHQHLGRREMTDVIIETMKSNPDELKTTVEERKSSEASPTAQR
SKDHSKECINAAPDSPSKQLPDQISFFSGNPSVEIVHGIMHLYKTNKMTSLKEDVRRS
AMLCILTVPAAMTSHDLMKFVAPFNEVIEQMKIIRDSTPNQYMVLIKFRAQADADSFY
MTCNGRQFNSIEDDVCQLVYVERAEVLKSEDGASLPVMDLTELPKCTVCLERMDESVN
GILTTLCNHSFHSQCLQRWDDTTCPVCRYCQTPEPVEENKCFECGVQENLRICLICGH
IGCGRYVSRHAYKHFEETQHTYAMQLTNHRVWDYAGDNYVHRLVASKTDGKIVQYECE
GDTCQEEKIDALQLEYSYLLTSQLESQRIYWEHKIVRIEKDTAEEINNMKTKFKETIE
KCDNLEHKLNDLLKEKQSVERKCTQLNTKVAKLTNELKEEQEMNKCLRANQVLLQNKL
KEEERVLKETCDQKDLQITEIQEQLRDVMFYLETQQKINHLPAETRQEIQEGQINIAM
ASASSPASSGGSGKLPSRKGRSKRGK"
BASE COUNT 604 a 486 c 545 g 444 t
ORIGIN
1 gttcgaggag ctgctgctgc tgaggcggcg gcaactgcat tgaggtggag gcggcaactg
61 ccggccccgg gccgctcggc ctctcggctc gccttccagc ctcgcctgag cccgccgggg
121 cccgcgccgg ccagcgcctg ccctatgagt gtgtcactgg ttgttatccg attggagctc
181 gcggaacact cgcctgtccc cgccggcttc ggcttcagcg ccgcggccgg ggaaatgtct
241 gatgaggaga taaaaaagac gacactagcc tcagctgtag cctgtttaga aggcaagtca
301 ccaggagaga aagtagcgat tatccatcag catctcggcc gtcgagaaat gacagatgtg
361 atcattgaga ccatgaagtc caacccagat gaactaaaaa ctacagtgga agaaaggaag
421 tcttcagaag cctcccccac tgcgcaaaga agtaaagatc acagtaagga atgcataaac
481 gctgccccag attctccgtc caaacagctt ccagaccaga tttcattctt cagtggaaat
541 ccatcagttg aaatagttca tggtattatg cacctatata agacaaataa gatgacctcc
601 ttaaaagaag atgtgcggcg cagtgccatg ctgtgtattc tcacagtccc tgctgcaatg
661 accagtcatg accttatgaa gtttgttgcc ccatttaacg aagtaattga acaaatgaaa
721 attatcagag actctactcc caaccaatat atggtgctga taaagtttcg tgcacaggct
781 gatgcggata gtttttatat gacatgcaat ggccgccagt tcaactcaat agaagatgac
841 gtttgccagc tagtgtatgt ggaaagagct gaagtgctca aatctgaaga tggcgccagc
901 ctcccagtga tggacctgac tgaactcccc aagtgcacgg tgtgtctgga gcgcatggac
961 gagtctgtga atggcatcct cacaacgtta tgtaaccaca gcttccacag ccagtgtcta
1021 cagcgctggg acgataccac gtgtcctgtt tgccggtact gtcaaacgcc cgagccagta
1081 gaagaaaata agtgttttga gtgtggtgtt caggaaaatc ttcggatttg tttaatatgc
1141 ggccacatag gatgtggacg gtatgttagt cgacatgctt ataagcactt tgaggaaacg
1201 cagcacacgt atgccatgca gcttaccaac catcgagtct gggactatgc tggagataac
1261 tatgttcatc gactggttgc aagtaaaaca gatggaaaaa tagtacagta tgaatgtgag
1321 ggggatactt gccaggaaga gaaaatagat gccttacagt tagagtattc atatttacta
1381 acaagccagc tggaatctca gcgaatctac tgggaacaca agatagttcg gatagagaag
1441 gacacagcag aggaaattaa caacatgaag accaagttta aagaaacaat tgagaagtgt
1501 gataatctag agcacaaact aaatgatctc ctaaaagaaa agcagtctgt ggaaagaaag
1561 tgcactcagc taaacacaaa agtggccaaa ctcaccaacg agctcaaaga ggagcaggaa
1621 atgaacaagt gtttgcgagc caaccaagtc ctcctgcaga acaagctaaa agaggaggag
1681 agggtgctga aggagacctg tgaccaaaaa gatctgcaga tcaccgagat ccaggagcag
1741 ctgcgtgacg tcatgttcta cctggagaca cagcagaaga tcaaccatct gcctgccgag
1801 acccggcagg aaatccagga gggacagatc aacatcgcca tggcctcggc ctcgagccct
1861 gcctcttcgg ggggcagtgg gaagttgccc tccaggaagg gccgcagcaa gaggggcaag
1921 tgaccttcag agcaacagac atccctgaga ctgttctccc tgacactgtg agagtgtgct
1981 gggaccttca gctaaatgtg agggtgggcc ctaataagta caagtgagga tcaagccaca
2041 gttgtttggc tctttcattt gctagtgtgt gatgtagtg
//