LOCUS AK290378 1788 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78516 complete cds.
ACCESSION AK290378
VERSION AK290378.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1788)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1788
/clone="CTONG3006690"
/clone_lib="CTONG3"
/db_xref="H-InvDB:HIT000423175"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 302..1579
/codon_start=1
/protein_id="BAF83067.1"
/transl_table=1
/translation="MGEDAAQAEKFQHPGSDMRQEKPSSPSPMPSSTPSPSLNLGNTE
EAIRDNSQVNAVTVLTLLDKLVNMLDAVQENQHKMEQRQISLEGSVKGIQNDLTKLSK
YQASTSNTVSKLLEKSRKVSAHTRAVKERMDRQCAQVKRLENNHAQLLRRNHFKVLIF
QEENEIPASVFVKQPVSGAVEGKEELPDENKSLEETLHTVDLSSDDDLPHDEEALEDS
AEEKVEESRAEKIKRSSLKKVDSLKKAFSRQNIEKKMNKLGTKIVSVERREKIKKSLT
SNHQKISSGKSSPFKVSPLTFGRKKVREGESHAENETKSEDLPSSEQMPNDQEEESFA
EGHSEASLASALVEGEIAEGAAEKATSRGSNSGMDSNIDLTIVEDEEEESVALEQAQK
VRYEGSYALTSEEAERSDGDPVQPAVLQVHQTS"
BASE COUNT 492 a 496 c 496 g 304 t
ORIGIN
1 aacaaagtgt cctgtgccca gaacgcggtt aggaagtgtg tgcatacgtc tgaaccctaa
61 atggttctca gttctgtaaa cttctcctcc cactgggtgg agtagggcct ttaagagcag
121 ctggaatgca gttcccctga tcagcgtagc cagttgttgc ctgtctgaac ctctgccagt
181 cctggagact ggtgccctga gctccaacca gcgggcctca tcctacaccc tcaccaccgc
241 aacttctcac ccgagcaaga agcagctccc agagagaaag aacgttccca cctgcctagc
301 catgggagag gacgctgcac aggccgaaaa gttccagcac cctgggtctg acatgcggca
361 ggaaaagccc tcgagcccca gcccgatgcc ttcctccaca ccaagcccca gcctgaacct
421 agggaacaca gaggaggcca tccgggacaa ctcacaggtg aacgcagtca cggtgctcac
481 gctcctggac aagctggtga acatgctaga cgctgtgcag gagaaccagc acaagatgga
541 gcagcgacag atcagtttgg agggctccgt gaagggcatc cagaatgacc tcaccaagct
601 ctccaagtac caggcctcca ccagcaacac ggtgagcaag ctgctggaga agtcccgcaa
661 ggtcagcgcc cacacgcgcg cggtcaaaga gcgcatggat aggcagtgcg cacaggtgaa
721 gcggctggag aacaaccacg cccagctcct ccgacgcaac catttcaaag tgctcatctt
781 ccaggaggaa aatgagatcc ctgccagcgt gtttgtgaaa cagcccgttt ccggcgccgt
841 ggaagggaag gaggagcttc cggatgaaaa caaatccctg gaggaaaccc tgcacaccgt
901 ggacctctcc tcagatgatg atttgcccca cgatgaggag gccctggaag acagtgccga
961 ggaaaaggtg gaagaaagta gggcagagaa aataaaaaga tccagcctga agaaagtgga
1021 tagcctcaag aaagcatttt ctcgccagaa catcgagaaa aagatgaaca agctggggac
1081 aaagatcgta tctgtagaga ggagagagaa gattaagaaa tctctcacgt caaatcacca
1141 gaaaatatcc tcaggaaaaa gctccccctt caaggtttct cccctcactt tcgggcggaa
1201 gaaagtccga gagggagaaa gccatgcaga aaatgagacc aagtcagaag acctgcctag
1261 cagtgagcag atgccaaatg accaggaaga ggagtccttt gcagagggtc attccgaagc
1321 gtccctcgcc agcgctctgg tggaagggga aattgcagag ggggctgctg agaaggcgac
1381 ctccaggggg agtaactcgg ggatggacag caacatcgac ttgactattg tggaagatga
1441 agaggaggag tcagtggccc tggaacaggc acagaaggta cgctatgagg gtagctacgc
1501 gctaacatcc gaggaggcgg agcgctccga tggggacccc gtgcagcccg ccgtgctcca
1561 ggtgcaccag acctcctgag cttagagcca ccgtgccatc ctgtgctgtg ctcaagcggg
1621 cagccagggc tgaagaacaa actcttgcac atctccagca cgactcaccc actcctgcgt
1681 tcctgtccag gcagtaatca ttgaccatat agtcatagta agacacacga gaccaggctt
1741 taccatgaaa gcgacctgtc acggactcca cttttaattt gctcttag
//