LOCUS AK290346 1048 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77046 complete cds, highly similar to Homo
sapiens RIB43A domain with coiled-coils 1 (RIBC1), transcript
variant 2, mRNA.
ACCESSION AK290346
VERSION AK290346.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1048)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1048
/clone="CTONG2028320"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000423143"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 189..767
/codon_start=1
/note="highly similar to Homo sapiens RIB43A domain with
coiled-coils 1 (RIBC1), transcript variant 2, mRNA"
/protein_id="BAF83035.1"
/transl_table=1
/translation="MYNIKQSTDTKEAAAIEARRNREKERQNRFFNVRNRVMGVDVQA
LNNQVGDRKRREAAERSKEAAYGTSQVQYDVVVQMLEKEEADRTRQLAKKVQEFREQK
QQLENGREFSLWDPGQVWKGLPTYLSYSNTYPGPASLQYFSGEDLDRDTRLRMQQGQF
RYNLERQQQEQQQAKVDENYTGKQPGPPDSET"
BASE COUNT 302 a 236 c 301 g 209 t
ORIGIN
1 agagcagttc ttgaggttca aggaggcggg ggagacctga gctcacgctt gctgagacag
61 aagtcacagc aggattatgc ccctcagggc aagaggaaga gttcagaaac tgccgccgta
121 acccaagaac aaagttgcat gcagagccaa cctaagagct tcaaaatcgg gattccttac
181 tgagaaagat gtataacata aaacagtcaa cagataccaa ggaagcagca gccatcgagg
241 ctagaagaaa tcgagaaaaa gagcgacaaa accgattctt caatgtgcgg aaccgagtca
301 tgggggtgga tgtccaggcc ctgaacaacc aggtgggaga ccgaaagcgt cgggaagcag
361 cagaaagaag caaggaggca gcttatggta ccagccaggt gcagtatgat gtggtagtcc
421 agatgttaga gaaggaagag gcagatcgaa cacgtcagct ggccaagaaa gtccaggagt
481 ttcgggagca gaagcagcag ctcgagaacg ggcgtgaatt tagtctttgg gatccaggcc
541 aagtctggaa ggggcttcca acctatctta gttacagtaa tacctatcct ggtccagcca
601 gcctgcagta cttctctggg gaagacctag acagggacac acggctgaga atgcagcagg
661 ggcagttcag gtacaacttg gaaaggcaac agcaggagca acagcaagcc aaggttgatg
721 agaattatac aggtaagcag cccggccctc cagactcaga gacctgaggc ctagtgggga
781 tctgtcctaa gctgagtaca gcagccaggg gaccagaact gtgtggggag gtccacttat
841 ccatagggtt ggtgctgaaa tgttaggttg tgcagacccc aacctccctg acttccttca
901 gtaactgaca gtgtagcatt gttcttgatt agtttggcac tccattacgt ggaggcagca
961 cagtgcagac agacctaatg gctctgccac ttactagctg gtttgggcaa atgagttttc
1021 ccttctgtgc ttcagtttct tcatcttt
//