LOCUS AK290338 2672 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75259 complete cds, highly similar to Homo
sapiens ubiquitin specific peptidase 13 (isopeptidase T-3), mRNA.
ACCESSION AK290338
VERSION AK290338.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2672)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2672
/clone="CTONG2024856"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000423135"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 29..2620
/codon_start=1
/note="highly similar to Homo sapiens ubiquitin specific
peptidase 13 (isopeptidase T-3), mRNA"
/protein_id="BAF83027.1"
/transl_table=1
/translation="MQRRGALFGMPGGSGGRKMAAGDIGELLVPHMPTIRVPRSGDRV
YKNECAFSYDSPNSEGGLYVCMNTFLAFGREHVERHFRKTGQSVYMHLKRHVREKVRG
ASGGALPKRRNSKIFLDLDTDDDLNSDDYEYEDEAKLVIFPDHYEIALPNIEELPALV
TIACDAVLSSKSPYRKQDPDTWENELPVSKYANNLTQLDNGVRIPPSGWKCARCDLRE
NLWLNLTDGSVLCGKWFFDSSGGNGHALEHYRDMGYPLAVKLGTITPDGADVYSFQEE
EPVLDPHLAKHLAHFGVDMLHMHGTENGFQDNDIKLRVSEWEVIQESGAKLKPMYGPG
YTGPKNLGNSCYLSSVMQAIFSIPEFQRAYVGNLPRIFDYSPLDPTQDFNTQMTKLGH
GLLSGQYSKPPVKSELIEQVMKEEHKPQQNGISPRMFKAFVSKSHPEFSSNRQQDAQE
FFLHLVNLVERNRIGSENPSDVFRFLVEERIQCCQTRKVRYTERVDYLMQLPVAMEAA
TNKDELIAYELTRREAEANRRPLPELVRAKIPFSACLQAFSEPENVDDFWSSALQAKS
AGVKTSRFASFPEYLVVQIKKFTFGLDWVPKKFDVSIDMPDLLDINHLRARGLQPGEE
ELPDISPPIVIPDDSKDRLMNQLIDPSDIDESSVMQLAEMGFPLEACRKAVYFTGNMG
AEVAFNWIIVHMEEPDFAEPLTMPGYGGAASAGASVFGASGLDNQPPEEIVAIITSMG
FQRNQAIQALRATNNNLERALDWIFSHPEFEEDSDFVIEMENNANANIISEAKPEGPR
VKDGSGTYELFAFISHMGTSTMSGHYICHIKKEGRWVIYNDHKVCASERPPKDLGYMY
FYRRIPS"
BASE COUNT 748 a 615 c 683 g 626 t
ORIGIN
1 tcgctcggct ccggtgcgcg ccgaggccat gcagcgccgg ggcgccctgt tcggcatgcc
61 gggcggcagc ggaggcagga agatggctgc aggagacatc ggcgagctgc tagtgcccca
121 catgcccacg atccgcgtgc ccaggtccgg cgacagggtc tacaagaacg agtgcgcctt
181 ctcctacgac tctcccaatt ctgaaggtgg actctatgta tgcatgaata catttttggc
241 ctttggaagg gaacatgttg aaagacattt tcgaaaaact ggacagagtg tatacatgca
301 cctgaaaaga catgtgcgag agaaggtaag aggggcgtct ggtggagcgt taccaaaaag
361 gaggaattcc aagatttttt tagatctaga tactgatgac gatttaaata gcgacgatta
421 tgaatatgaa gatgaagcca aacttgttat attcccagat cactatgaaa tagcactacc
481 aaatattgag gagttaccag ccctggtaac aattgcttgt gatgcagttc tcagctcaaa
541 atctccatac agaaagcagg acccagacac gtgggaaaat gaattgccag tgtctaaata
601 tgccaacaac ctcacccagc tggacaatgg agtcaggatt cctccaagtg gttggaagtg
661 tgccagatgc gacctgcgag aaaacctctg gttgaatctg actgacggct ctgtcctgtg
721 tggaaagtgg ttctttgaca gctctggggg caacgggcat gcgctggagc attacagaga
781 catgggctac ccactagccg tgaaactggg aaccatcact cctgacgggg cagatgttta
841 ttcttttcaa gaagaagaac ctgttttgga tcctcatttg gccaagcact tagcgcattt
901 tggagttgat atgcttcata tgcatgggac agagaatggg ttccaggaca atgacatcaa
961 gctgagggtc agtgagtggg aagtgatcca ggagtcgggc gcgaaactga agccaatgta
1021 tggtcctggc tacacgggtc cgaagaacct gggcaacagc tgctatctca gctctgtcat
1081 gcaggccatc ttcagcatcc cagaattcca gagagcgtat gtaggaaacc ttcccagaat
1141 atttgactac tcgcctttag atccaacaca agatttcaac acacagatga ctaagttagg
1201 acatggcctt ctctcaggcc agtattcaaa gcctccggtg aaatctgaac tcattgaaca
1261 ggtgatgaag gaggagcaca agccacagca gaacgggatc tctccgcgca tgtttaaggc
1321 ctttgtaagc aagagccacc cggaattctc ctctaacagg cagcaagatg cccaggaatt
1381 cttcttgcac ctggtgaatc tagtagagag gaaccgcatc ggctcagaaa acccaagcga
1441 tgtttttcgt tttttggtgg aagaacgcat tcagtgctgt cagacccgga aagtccgcta
1501 cacggagagg gtggattacc tgatgcagtt acctgtggcc atggaggcgg caaccaacaa
1561 ggatgaactg atcgcttatg aactaacgag aagggaagca gaagcaaaca gaagacccct
1621 tcctgagttg gtacgtgcca agataccatt tagtgcctgc cttcaggcct tctctgaacc
1681 agaaaatgtt gatgatttct ggagcagtgc cctacaagca aagtctgcgg gtgtgaaaac
1741 atctcgcttt gcttcattcc ctgaatactt ggtagtgcag ataaagaagt tcacttttgg
1801 tcttgactgg gttcccaaaa aatttgatgt ttctattgat atgccagacc tacttgatat
1861 caaccatctc cgagccaggg ggttacagcc aggagaggaa gaacttccag acatcagccc
1921 ccccatagtc attcctgatg actcaaaaga tcgcctgatg aaccaattga tagacccatc
1981 agacatcgat gagtcatcag tgatgcagct ggccgagatg ggtttcccgc tggaagcatg
2041 tcgcaaggct gtgtacttca ctggaaatat gggcgccgag gtggccttca actggatcat
2101 tgttcacatg gaagagccag attttgctga gccgctgacc atgcctggtt atggaggggc
2161 agcttctgct ggagcctctg tttttggtgc ttctggactg gataaccaac ctccagagga
2221 aatcgtagct atcatcacct ccatgggatt tcagcgaaat caggctattc aggcactacg
2281 agcaacgaat aataacctgg aaagagcact ggattggatc tttagccacc ctgagtttga
2341 agaagacagt gattttgtga ttgagatgga gaataatgcc aatgcaaaca ttatttctga
2401 ggccaagccc gaaggaccta gagtcaagga tggatctgga acatatgagc tatttgcatt
2461 catcagtcac atgggaacat ccacaatgag tggtcattac atttgccata tcaaaaagga
2521 aggaagatgg gtgatttaca atgaccacaa agtttgtgcc tcagaaaggc cccctaaaga
2581 cctgggctac atgtactttt accgcaggat accaagctaa acctcaaata taaaaattgg
2641 cgaaaagaag ccatacgcct ttttaatttg cc
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