LOCUS AK290323 1798 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78162 complete cds, highly similar to Homo
sapiens mRNA for hurpin.
ACCESSION AK290323
VERSION AK290323.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1798)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1798
/clone="CTONG2016431"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000423120"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 143..1318
/codon_start=1
/note="highly similar to Homo sapiens mRNA for hurpin"
/protein_id="BAF83012.1"
/transl_table=1
/translation="MDSLGAVSTRLGFDLFKELKKTNDGNIFFSPVGILTAIGMVLLG
TRGATASQLEEVFHSEKETKSSRIKAEEKEVIENTEAVHQQFQKFLTEISKLTNDYEL
NITNRLFGEKTYLFLQKYLDYVEKYYHASLEPVDFVNAADESRKKINSWVESKTNEKI
KDLFPDGSISSSTKLVLVNMVYFKGQWDREFKKENTKEEKFWMNKSTSKSVQMMTQSH
SFSFTFLEDLQAKILGIPYKNNDLSMFVLLPNDIDGLEKIIDKISPEKLVEWTSPGHM
EERKVNLHLPRFEVEDSYDLEAVLAAMGMGDAFSEHKADYSGMSSGSGLYAQKFLHSS
FVAVTEEGTEAAAATGIGFTVTSAPGHENVHCNHPFLFFIRHNESNSILFFGRFSSP"
BASE COUNT 552 a 370 c 393 g 483 t
ORIGIN
1 acgcaaggtg gaaaaccact gctgaagcag atgtggagaa ctataaatta aggatcccag
61 ctacttaatt gacttatgct tcctagttcg ttgcccagcc accaccgtct ctccaaaaac
121 ccgaggtctc gctaaaatca tcatggattc acttggcgcc gtcagcactc gacttgggtt
181 tgatcttttc aaagagctga agaaaacaaa tgatggcaac atcttctttt cccctgtggg
241 catcttgact gcaattggca tggtcctcct ggggacccga ggagccaccg cttcccagtt
301 ggaggaggtg tttcactctg aaaaagagac gaagagctca agaataaagg ctgaagaaaa
361 agaggtgatt gagaacacag aagcagtaca tcaacaattc caaaagtttt tgactgaaat
421 aagcaaactc actaatgatt atgaactgaa cataaccaac aggctgtttg gagaaaaaac
481 atacctcttc cttcaaaaat acttagatta tgttgaaaaa tattatcatg catctctgga
541 acctgttgat tttgtaaatg cagccgatga aagtcgaaag aagattaatt cctgggttga
601 aagcaaaaca aatgaaaaaa tcaaggactt gttcccagat ggctctatta gtagctctac
661 caagctggtg ctggtgaaca tggtttattt taaagggcaa tgggacaggg agtttaagaa
721 agaaaatact aaggaagaga aattttggat gaataagagc acaagtaaat ctgtacagat
781 gatgacacag agccattcct ttagcttcac tttcctggag gacttgcagg ccaaaattct
841 agggattcca tataaaaaca acgacctaag catgtttgtg cttctgccca acgacatcga
901 tggcctggag aagataatag ataaaataag tcctgagaaa ttggtagagt ggactagtcc
961 agggcatatg gaagaaagaa aggtgaatct gcacttgccc cggtttgagg tggaggacag
1021 ttacgatcta gaggcggtcc tggctgccat ggggatgggc gatgccttca gtgagcacaa
1081 agccgactac tcgggaatgt cgtcaggctc cgggttgtac gcccagaagt tcctgcacag
1141 ttcctttgtg gcagtaactg aggaaggcac cgaggctgca gctgccactg gcataggctt
1201 tactgtcaca tccgccccag gtcatgaaaa tgttcactgc aatcatccct tcctgttctt
1261 catcaggcac aatgaatcca acagcatcct cttcttcggc agattttctt ctccttaaga
1321 tgaccgttgc catggcattg ctgcttttag caaaaaacaa ctaccagtgt tactcatatg
1381 attatgaaaa tcgtccattc ttttaaatgt tgtctcactt gcatttccag tcttggccat
1441 caaatcaatg atttaatgac tccaataatg tgtgtgttta taaccatcct cgaaagtgaa
1501 atgtcctttt ctttgtgcca tgcgtaaggt gagtcaaacc aaacctcatt gataatctcc
1561 ctttggtttc ctttgaaagt aaattggtat cttgtagttt tgtgcacacg aaaggagaga
1621 aagtctctcc agtgaagagt acgaactagt aattttgggg ggtctctcta attctggtat
1681 tttgacatgt tataatacgc aagtaaaata aaacaatagt ttactcagct catgttacta
1741 ttccccaaca gatattgtgg caaatcacac ataggaaaga gaatttggga atacagta
//