LOCUS AK290290 1664 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78206 complete cds, highly similar to Homo
sapiens lipoprotein lipase (LPL), mRNA.
ACCESSION AK290290
VERSION AK290290.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1664)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1664
/clone="CTONG2002285"
/clone_lib="CTONG2"
/db_xref="H-InvDB:HIT000423087"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="tumor tissue"
/organism="Homo sapiens"
/tissue_type="tongue, tumor tissue"
CDS 189..1616
/codon_start=1
/note="highly similar to Homo sapiens lipoprotein lipase
(LPL), mRNA"
/protein_id="BAF82979.1"
/transl_table=1
/translation="MESKALLVLTLAMWLQSLTASRGGVAAADQRRDFIDIESKFALR
TPEDTAEDTCHLIPGVAESVATCHFNHSSKTFMVIHGWTVTGMYESWVPKLVAALYKR
EPDSNVIVVDWLSRAQEHYPVSAGYTKLVGQDVARFINWMEEEFNYPLDNVHLLGYSL
GAHAAGIAGSLTNKKVNRITGLDPAGPNFEYAEAPSRLSPDDADFVDVLHTFTRGSPG
RSIGIQKPVGHVDIYPNGGTFQPGCNIGEAIRVIAERGLGDVDQLVKCSHERSIHLFI
DSLLNEENPSKAYRCSSKEAFEKGLCLSCRKNRCNNLGYEINKVRAKRSSKMYLKTRS
QMPYKVFHYQVKIHFSGTESETHTNQAFEISLYGTVAESENIPFTLPEVSTNKTYSFL
IYTEVDIGELLMLKLKWKSDSYFSWSDWWSSPGFAIQKIRVKAGETQKKVIFCSREKV
SHLQKGKAPAVFVKCHDKSLNKKSG"
BASE COUNT 444 a 421 c 422 g 377 t
ORIGIN
1 gtcagactcg attccccctc ttcctcctcc tcaagggaaa gctgcccact tctagctgcc
61 ctgccatccc ctttaaaggg cgacttgctc agcgccaaac cgcggctcca gccctctcca
121 gcctccggct cagccggctc atcagtcggt ccgcgccttg cagctcctcc agagggacgc
181 gccccgagat ggagagcaaa gccctgctcg tgctgactct ggccatgtgg ctccagagtc
241 tgaccgcctc ccgcggaggg gtggccgccg ccgaccaaag aagagatttt atcgacatcg
301 aaagtaaatt tgccctaagg acccctgaag acacagctga ggacacttgc cacctcattc
361 ccggagtagc agagtccgtg gctacctgtc atttcaatca cagcagcaaa accttcatgg
421 tgatccatgg ctggacggta acaggaatgt atgagagttg ggtgccaaaa cttgtggccg
481 ccctgtacaa gagagaacca gactccaatg tcattgtggt ggactggctg tcacgggctc
541 aggagcatta cccagtgtcc gcgggctaca ccaaactggt gggacaggat gtggcccggt
601 ttatcaactg gatggaggag gagtttaact accctctgga caatgtccat ctcttgggat
661 acagccttgg agcccatgct gctggcattg caggaagtct gaccaataag aaagtcaaca
721 gaattactgg cctcgatcca gctggaccta actttgagta tgcagaagcc ccgagtcgtc
781 tttctcctga tgatgcagat tttgtagacg tcttacacac attcaccaga gggtcccctg
841 gtcgaagcat tggaatccag aaaccagttg ggcatgttga catttacccg aatggaggta
901 cttttcagcc aggatgtaac attggagaag ctatccgcgt gattgcagag agaggacttg
961 gagatgtgga ccagctagtg aagtgctccc acgagcgctc cattcatctc ttcatcgact
1021 ctctgttgaa tgaagaaaat ccaagtaagg cctacaggtg cagttccaag gaagcctttg
1081 agaaagggct ctgcttgagt tgtagaaaga accgctgcaa caatctgggc tatgagatca
1141 ataaagtcag agccaaaaga agcagcaaaa tgtacctgaa gactcgttct cagatgccct
1201 acaaagtctt ccattaccaa gtaaagattc atttttctgg gactgagagt gaaacccata
1261 ccaatcaggc ctttgagatt tctctgtatg gcaccgtggc cgagagtgag aacatcccat
1321 tcactctgcc tgaagtttcc acaaataaga cctactcctt cctaatttac acagaggtag
1381 atattggaga actactcatg ttgaagctca aatggaagag tgattcatac tttagctggt
1441 cagactggtg gagcagtccc ggcttcgcca ttcagaagat cagagtaaaa gcaggagaga
1501 ctcagaaaaa ggtgatcttc tgttctaggg agaaagtgtc tcatttgcag aaaggaaagg
1561 cacctgcggt atttgtgaaa tgccatgaca agtctctgaa taagaagtca ggctgaaact
1621 gggcgaatct acagaacaaa gaacggcatg tgaattctgt gaag
//