LOCUS AK290279 1522 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76079 complete cds, highly similar to Homo
sapiens lymphocyte-specific protein 1 (LSP1), mRNA.
ACCESSION AK290279
VERSION AK290279.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1522)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1522
/clone="COLON2007796"
/clone_lib="COLON2"
/db_xref="H-InvDB:HIT000423076"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="colon"
CDS 14..1033
/codon_start=1
/note="highly similar to Homo sapiens lymphocyte-specific
protein 1 (LSP1), mRNA"
/protein_id="BAF82968.1"
/transl_table=1
/translation="MAEASSDPGAEEREELLGPTAQWSVEDEEEAVHEQCQHERDRQL
QAQDEEGGGHVPERPKQEMLLSLKPSEAPELDEDEGFGDWSQRPEQRQQHEGAQGTLD
SGEPPQCRSPEGEQEDRPGLHAYEKEDSDEVHLEELSLSKEGPGPEDTVQDNLGAAGA
EEEQEEHQKCQQPRTPSPLVLEGTIEQSSPPLSPTTKLIDRTESLNRSIEKSNSVKKS
QPDLPISKIDQWLEQYTQAIETAGRTPKLARQASIELPSMAVASTKSRWETGEVQAQS
AAKTPSCKDIVAGDMSKKSLWEQKGGSKTSSTIKSTPSGKRYKFVATGHGKYEKVLVE
GGPPP"
BASE COUNT 344 a 459 c 477 g 242 t
ORIGIN
1 agactacagg ctgatggcgg aggcttcgag tgacccgggt gctgaggagc gggaagagtt
61 gctggggccc actgctcagt ggagcgtgga ggacgaggag gaggccgtcc acgagcaatg
121 ccagcatgag agagacaggc agcttcaggc ccaggacgag gagggaggcg gccatgtccc
181 cgagcggccg aagcaggaga tgctcctcag cctgaagccc tcggaggccc ctgaactgga
241 tgaggacgag ggctttggcg actggtccca gaggccagag cagcggcagc agcacgaggg
301 ggcgcagggc accttggaca gcggagagcc cccccagtgc aggagtcctg agggggagca
361 agaggacagg cccggcctgc atgcctacga aaaggaggac agtgatgaag tccacctgga
421 ggagttgagt ctgagcaagg aggggccagg cccagaggac actgtccagg acaacctggg
481 ggccgcaggg gctgaggagg aacaggagga gcaccagaaa tgtcagcagc ccaggacacc
541 cagccccttg gtcttggagg ggaccatcga acagagctcg cctcccctga gccctaccac
601 caaactcatc gacaggaccg agtccctaaa ccgctccata gagaagagta acagtgtgaa
661 gaaatcccag ccagacttgc ccatctccaa gattgatcag tggctggaac aatacaccca
721 ggccatcgag accgctggcc ggacccccaa gctagcccgc caggcctcca tagagctgcc
781 cagcatggct gtggccagta ccaagagtcg gtgggagacg ggtgaggtac aggctcagtc
841 tgcggccaag actccgtcct gcaaggatat tgtggctgga gacatgagca agaaaagcct
901 ctgggagcag aagggaggct ccaagacctc atcaacaatt aagagcaccc catctgggaa
961 gaggtataag tttgtggcca ccgggcatgg gaagtatgag aaggtgcttg tggaaggggg
1021 cccgcctccc taggcgtccc atctcgcttc ctgggtctgc aggtccagcc ggctggcacc
1081 ctccatgtac ccaggggaga ttccagccag acacccgccc cccggccctg gctaagaagt
1141 tgcttcctgt tgccagcatg acctaccctc gcctctttga tgccatccgc tgccacctcc
1201 ttttgctcct ggacccttta gcctctctgc ccttccactc tctgaccacc gcccccgccc
1261 tccccaccca gctccgcttc ttgttacttg ggggaggaaa gaaactcctg atcattggcc
1321 aaagggactt acccctggag aggccaagtg ccttctagga agttaggagg ttgaggcaca
1381 gcctgtgcag agagggtggg tcaccccccc agatccaagg ggaaactgca ggtcaagggc
1441 tgataacggc catgcaggat gcttgatgct gcgtcccccg ctgcttgccg ccccccaccc
1501 cgccattttg tataataaag ct
//