LOCUS AK290240 1434 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78013 complete cds, highly similar to Homo
sapiens platelet-activating factor receptor, mRNA.
ACCESSION AK290240
VERSION AK290240.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1434)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1434
/clone="CD34C2000531"
/clone_lib="CD34C2"
/db_xref="H-InvDB:HIT000423037"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/note="primary culture, CD34+ cells"
/organism="Homo sapiens"
/tissue_type="cord blood"
CDS 138..1166
/codon_start=1
/note="highly similar to Homo sapiens platelet-activating
factor receptor, mRNA"
/protein_id="BAF82929.1"
/transl_table=1
/translation="MEPHDSSHMDSEFRYTLFPIVYSIIFVLGVIANGYVLWVFARLY
PCKKFNEIKIFMVNLTMADMLFLITLPLWIVYYQNQGNWILPKFLCNVAGCLFFINTY
CSVAFLGVITYNRFQAVTRPIKTAQANTRKRGISLSLVIWVAIVGAASYFLILDSTNT
VPDSAGSGNVTRCFEHYEKGSVPVLIIHIFIVFSFFLVFLIILFCNLVIIRTLLMQPV
QQQRNAEVKRRALWMVCTVLAVFIICFVPHHVVQLPWTLAELGFQDSKFHQAINDAHQ
VTLCLLSTNCVLDPVIYCFLTKKFRKHLTEKFYSMRSSRKCSRATTDTVTEVVVPFNQ
IPGNSLKN"
BASE COUNT 304 a 440 c 340 g 350 t
ORIGIN
1 acttctgcaa ttgccagaca gcatagaggc tgagcctggg gccgggaccc agacagagac
61 acacggtcac tgcagctgaa gccgctgccc ctgctacagg caccaccagg accagctgat
121 cattccagcc cacagcaatg gagccacatg actcctccca catggactct gagttccgat
181 acactctctt cccgattgtt tacagcatca tctttgtgct cggggtcatt gctaatggct
241 acgtgctgtg ggtctttgcc cgcctgtacc cttgcaagaa attcaatgag ataaagatct
301 tcatggtgaa cctcaccatg gcggacatgc tcttcttgat caccctgcca ctttggattg
361 tctactacca aaaccagggc aactggatac tccccaaatt cctgtgcaac gtggctggct
421 gccttttctt catcaacacc tactgctctg tggccttcct gggcgtcatc acttataacc
481 gcttccaggc agtaactcgg cccatcaaga ctgctcaggc caacacccgc aagcgtggca
541 tctctttgtc cttggtcatc tgggtggcca ttgtgggagc tgcatcctac ttcctcatcc
601 tggactccac caacacagtg cccgacagtg ctggctcagg caacgtcact cgctgctttg
661 agcattacga gaagggcagc gtgccagtcc tcatcatcca catcttcatc gtgttcagct
721 tcttcctggt cttcctcatc atcctcttct gcaacctggt catcatccgt accttgctca
781 tgcagccggt gcagcagcag cgcaacgctg aagtcaagcg ccgggcgctg tggatggtgt
841 gcacggtctt ggcggtgttc atcatctgct tcgtgcccca ccacgtggtg cagctgccct
901 ggacccttgc tgagctgggc ttccaggaca gcaaattcca ccaggccatt aatgatgcac
961 atcaggtcac cctctgcctc cttagcacca actgtgtctt agaccctgtt atctactgtt
1021 tcctcaccaa gaagttccgc aagcacctca ccgaaaagtt ctacagcatg cgcagtagcc
1081 ggaaatgctc ccgggccacc acggatacgg tcactgaagt ggttgtgcca ttcaaccaga
1141 tccctggcaa ttccctcaaa aattagtccc tgcttccagg cctgaagtct tctcctccat
1201 gaacatcatg gactgagctg ggggaagaag ggatatctac tgtggtctgg gcaccacctc
1261 tgtgggcact ggtgggccat tagatttgga ggctacctca cctgggcagg gatgatggca
1321 gagccaggct gttggaaaat ccagaactca aatgagcccc ttcatccgcc tgtgggcgca
1381 tactatagta actgtgactg atgactttat cctgagtccc ttaatcttat gggg
//