LOCUS       AK290233                3085 bp    mRNA    linear   HUM 09-JAN-2008
DEFINITION  Homo sapiens cDNA FLJ75622 complete cds, highly similar to Homo
            sapiens protein tyrosine phosphatase, receptor type, A (PTPRA),
            transcript variant 2, mRNA.
ACCESSION   AK290233
VERSION     AK290233.1
KEYWORDS    FLI_CDNA; oligo capping.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3085)
  AUTHORS   Isogai,T. and Yamamoto,J.
  TITLE     Direct Submission
  JOURNAL   Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
            Contact:Takao Isogai
            Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
            Chiyoda-ku, Tokyo 101-0044, Japan
            E-mail :flj-cdna@nifty.com
REFERENCE   2
  AUTHORS   Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
            Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
            Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
            Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
  TITLE     NEDO human cDNA sequencing project
  JOURNAL   Unpublished (2007)
COMMENT     Human cDNA sequencing project focused on splicing variants of mRNA
            in NEDO functional analysis of protein and research application
            project supported by Ministry of Economy, Trade and Industry,
            Japan; cDNA selection for complete cds sequencing: Reverse
            Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
            (Hitachi) and Japan Biological Informatics Consortium, Japan
            (JBIC); cDNA complete cds sequencing: JBIC; cDNA library
            construction: Helix Research Institute supported by Japan Key
            Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
            Research Association for Biotechnology, Japan, Biotechnology
            Center, National Institute of Technology and Evaluation, Japan and
            HRI; cDNA mapping to human genome: Central Research Laboratory,
            Hitachi; evaluation and annotation: REPRORI.
FEATURES             Location/Qualifiers
     source          1..3085
                     /clone="BRTHA3027807"
                     /clone_lib="BRTHA3"
                     /db_xref="H-InvDB:HIT000423030"
                     /db_xref="taxon:9606"
                     /mol_type="mRNA"
                     /note="cloning vector: pME18SFL3"
                     /organism="Homo sapiens"
                     /tissue_type="thalamus"
     CDS             333..2714
                     /codon_start=1
                     /note="highly similar to Homo sapiens protein tyrosine
                     phosphatase, receptor type, A (PTPRA), transcript variant
                     2, mRNA"
                     /protein_id="BAF82922.1"
                     /transl_table=1
                     /translation="MDSWFILVLLGSGLICVSANNATTVAPSVGITRLINSSTAEPVK
                     EEAKTSNPTSSLTSLSVAPTFSPNITLGPTYLTTVNSSDSDNGTTRTASTNSIGITIS
                     PNGTWLPDNQFTDARTEPWEGNSSTAATTPETFPPSDETPIIAVMVALSSLLVIVFII
                     IVLYMLRFKKYKQAGSHSNSFRLSNGRTEDVEPQSVPLLARSPSTNRKYPPLPVDKLE
                     EEINRRMADDNKLFREEFNALPACPIQATCEAASKEENKEKNRYVNILPYDHSRVHLT
                     PVEGVPDSDYINASFINGYQEKNKFIAAQGPKEETVNDFWRMIWEQNTATIVMVTNLK
                     ERKECKCAQYWPDQGCWTYGNIRVSVEDVTVLVDYTVRKFCIQQVGDMTNRKPQRLIT
                     QFHFTSWPDFGVPFTPIGMLKFLKKVKACNPQYAGAIVVHCSAGVGRTGTFVVIDAML
                     DMMHTERKVDVYGFVSRIRAQRCQMVQTDMQYVFIYQALLEHYLYGDTELEVTSLETH
                     LQKIYNKIPGTSNNGLEEEFKKLTSIKIQNDKMRTGNLPANMKKNRVLQIIPYEFNRV
                     IIPVKRGEENTDYVNASFIDGYRQKDSYIASQGPLLHTIEDFWRMIWEWKSCSIVMLT
                     ELEERGQEKCAQYWPSDGLVSYGDITVELKKEEECESYTVRDLLVTNTRENKSRQIRQ
                     FHFHGWPEVGIPSDGKGMISIIAAVQKQQQQSGNHPITVHCSAGAGRTGTFCALSTVL
                     ERVKAEGILDVFQTVKSLRLQRPHMVQTLEQYEFCYKVVQEYIDAFSDYANFK"
BASE COUNT          867 a          758 c          763 g          697 t
ORIGIN      
        1 gctgccgcca tcactgtcgc ccgcccagtc gcccctcagc cgcttcccct cgccatggag
       61 gcgaggccgc cgccgccgcc gcggggctcg gagccgcggg ccgggcggcg gccctgaggg
      121 ctagtggcgg cccgaaacgc cgccgcggag ccgaggcgga gccgctgtcc tcgtccccag
      181 cggtcccgcc caacgcccga ctctgtgaca caactaaaaa aaaacaaagg tatttatgga
      241 attccactga gtggtaatgg atgatgcagt tcaaataact aaggacacat gttcaaagag
      301 cataattaac tttttaaaag aagctaataa gcatggattc ctggttcatt cttgttctgc
      361 tcggcagtgg tctgatatgt gtcagtgcca acaatgctac cacagttgca ccttctgtag
      421 gaattacaag attaattaac tcatcaacgg cagaaccagt taaagaagag gccaaaactt
      481 caaatccaac ttcttcacta acttctcttt ctgtggcacc aacattcagc ccaaatataa
      541 ctctgggacc cacctattta accactgtca attcttcaga ctctgacaat gggaccacaa
      601 gaacagcaag caccaattct ataggcatta caatttcacc aaatggaacg tggcttccag
      661 ataaccagtt cacggatgcc agaacagaac cctgggaggg gaattccagc accgcagcaa
      721 ccactccaga aactttccct ccttcagatg agacaccaat tattgcggtg atggtggccc
      781 tgtcctctct gctagtgatc gtgtttatta tcatagtttt gtacatgtta aggtttaaga
      841 aatacaagca agctgggagc cattccaatt ctttccgctt atccaacggc cgcactgagg
      901 atgtggagcc ccagagtgtg ccacttctgg ccagatcccc aagcaccaac aggaaatacc
      961 cacccctgcc cgtggacaag ctggaagagg aaattaaccg gagaatggca gacgacaata
     1021 agctcttcag ggaggaattc aacgctctcc ctgcatgtcc tatccaggcc acctgtgagg
     1081 ctgcttccaa ggaggaaaac aaggaaaaaa atcgatatgt aaacatcttg ccttatgacc
     1141 actctagagt ccacctgaca ccggttgaag gggttccaga ttctgattac atcaatgctt
     1201 cattcatcaa cggttaccaa gaaaagaaca aattcattgc tgcacaagga ccaaaagaag
     1261 aaacggtgaa tgatttctgg cggatgatct gggaacaaaa cacagccacc atcgtcatgg
     1321 ttaccaacct gaaggagaga aaggagtgca agtgcgccca gtactggcca gaccaaggct
     1381 gctggaccta tgggaatatt cgggtgtctg tagaggatgt gactgtcctg gtggactaca
     1441 cagtacggaa gttctgcatc cagcaggtgg gcgacatgac caacagaaag ccacagcgcc
     1501 tcatcactca gttccacttt accagctggc cagactttgg ggtgcctttt accccgatcg
     1561 gcatgctcaa gttcctcaag aaggtgaagg cctgtaaccc tcagtatgca ggggccatcg
     1621 tggtccactg cagtgcaggt gtagggcgta caggtacctt tgtcgtcatt gatgccatgc
     1681 tggacatgat gcatacagaa cggaaggtgg acgtgtatgg ctttgtgagc cggatccggg
     1741 cacagcgctg ccagatggtg caaaccgata tgcagtatgt cttcatatac caagcccttc
     1801 tggagcatta tctctatgga gatacagaac tggaagtgac ctctctagaa acccacctgc
     1861 agaaaattta caacaaaatc ccagggacca gcaacaatgg attagaggag gagtttaaga
     1921 agttaacatc aatcaaaatc cagaatgaca agatgcggac tggaaacctt ccagccaaca
     1981 tgaagaagaa ccgtgtttta cagatcattc catatgaatt caacagagtg atcattccag
     2041 ttaagcgggg cgaagagaat acagactatg tgaacgcatc ctttattgat ggctaccggc
     2101 agaaggactc ctatatcgcc agccagggcc ctcttctcca cacaattgag gacttctggc
     2161 gaatgatctg ggagtggaaa tcctgctcta tcgtgatgct aacagaactg gaggagagag
     2221 gccaggagaa gtgtgcccag tactggccat ctgatggact ggtgtcctat ggagatatta
     2281 cagtggaact gaagaaggag gaggaatgtg agagctacac cgtccgagac ctcctggtca
     2341 ccaacaccag ggagaataag agccggcaga tccggcagtt ccacttccat ggctggcctg
     2401 aagtgggcat ccccagtgac ggaaagggca tgatcagcat catcgccgcc gtgcagaagc
     2461 agcagcagca gtcagggaac caccccatca ccgtgcactg cagcgccggg gcaggaagga
     2521 cggggacctt ctgtgccctg agcaccgtcc tggagcgtgt gaaagcagag gggattttgg
     2581 atgtcttcca gactgtcaag agcctgcggc tacagaggcc acacatggtc cagacactgg
     2641 aacagtatga gttctgctac aaggtggtgc aggagtatat tgatgcattc tcagattatg
     2701 ccaacttcaa gtaagcggca acaagggtcc gtggaccagg aggattgcct ttaatatttt
     2761 gtaatattct gttttgttaa tataccccaa attgtgtata tatcttataa ctgttttaga
     2821 aattggtaca taggcttcta ttacctatta ggtggaaatt ttatatgtaa atgtgttagc
     2881 actgatagtc ctttttccaa tgttttattg gggaattaaa tagtgtgatg tttggattga
     2941 tatcgtgaaa tcctcagccg agaaattggg ctggattgtg ctttggttaa tacatctttc
     3001 cctaaagaag ataaacacaa aatccattcc aggtagctcg gcaccaacta agaaaaaaag
     3061 cacaaagttc tcagagctct cgagg
//