LOCUS AK290231 1642 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77875 complete cds, highly similar to Homo
sapiens CHORD containing protein-1 (CHP1) mRNA.
ACCESSION AK290231
VERSION AK290231.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1642)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1642
/clone="BRTHA3026513"
/clone_lib="BRTHA3"
/db_xref="H-InvDB:HIT000423028"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 411..1409
/codon_start=1
/note="highly similar to Homo sapiens CHORD containing
protein-1 (CHP1) mRNA"
/protein_id="BAF82920.1"
/transl_table=1
/translation="MALLCYNRGCGQRFDPETNSDDACTYHPGVPVFHDALKGWSCCK
RRTTDFSDFLSIVGCTKGRHNSEKPPEPVKPEVKTTEKKELCELKPKFQEHIIQAPKP
VEAIKRPSPDEPMTNLELKISASLKQALDKLKLSSGNEENKKEEDNDEIKIGTSCKNG
GCSKTYQGLESLEEVCVYHSGVPIFHEGMKYWSCCRRKTSDFNTFLAQEGCTKGKHMW
TKKDAGKKVVPCRHDWHQTGGEVTISVYAKNSLPELSRVEANSTLLNVHIVFEGEKEF
DQNVKLWGVIDVKRSYVTMTATKIEITMRKAEPMQWASLELPAAKKQEKQKDATTD"
BASE COUNT 486 a 337 c 396 g 423 t
ORIGIN
1 atgagagggc ggggcggcca ctttgctgca ggagataccc aaagccagtt agcactgagg
61 aagtcagaag agaattgtca gtctctcgga caccttcatt ttctgccccg gaaatttctc
121 ctccgctgtt gtctgggctc cacttccgac ccccagttgc taccagctgt agtccgacct
181 atcgtggccc gggctagtgc cagcctcccg ccgctacctc cgcctcgtcc cttctcctct
241 gcgcctgcgc gaccggaaaa ttcgcgaagg ttcctgaaac gcaacggatc gtttccggaa
301 gccggtagcc gcctcagtcg tcagaccggt gctagcgaca cgggagtggc aaacgcatcc
361 tcttgccgtt cccggtgttt gggccttgcc tgtgacggtg ggaaaagaaa atggccttgc
421 tgtgctacaa ccggggctgc ggtcagcgct tcgatcctga gaccaattcc gacgatgctt
481 gcacatacca cccaggtgtt ccggtctttc acgatgcatt aaagggttgg tcttgctgta
541 agagaagaac aactgatttt tctgatttct taagcattgt aggctgtaca aaaggtagac
601 ataatagtga gaagccacct gagccagtca aacctgaagt caagactact gagaagaagg
661 agctatgtga attaaagccc aaatttcagg aacacatcat tcaagcccct aagccagtag
721 aagcaataaa aagaccaagc ccagatgaac caatgacaaa tttggaatta aaaatatctg
781 cctccctaaa acaagcactt gataaactta aactgtcatc agggaatgaa gaaaataaga
841 aagaagaaga caatgatgaa attaagattg ggacctcatg taagaatgga gggtgttcaa
901 agacatacca gggtctagag agtctagaag aagtctgtgt atatcattct ggagtaccta
961 ttttccatga ggggatgaaa tactggagct gttgtagaag aaaaacttct gattttaata
1021 cattcttagc ccaagagggc tgtacaaaag ggaaacacat gtggactaaa aaagatgctg
1081 ggaaaaaagt tgttccatgt agacatgact ggcatcagac tggaggtgaa gttaccattt
1141 cagtatatgc taaaaactca cttccagaac ttagccgagt agaagcaaat agcacattgt
1201 taaatgtgca tattgtattt gaaggagaga aggaatttga tcaaaatgtg aaattatggg
1261 gtgtgattga tgtaaagcga agttatgtaa ctatgactgc aacaaagatt gaaatcacta
1321 tgagaaaagc tgaaccgatg cagtgggcaa gccttgaact gcctgcagct aaaaagcagg
1381 aaaaacaaaa agatgccaca acagattgag tgggagatgg aaggaaggct attacattat
1441 ttccgaattt ttaatactgt gtgaagtggt ggcttgctgc tgtaatcttt tgttttgttg
1501 ttgtgttact gaatgtggca tttcagggtt aacattaggt tcttaaaagc caaagtcagt
1561 ttgtcttttt gtgcctctca tctttctttt gtgttatgta agattgatta ttcatttctc
1621 cctactggta ggaaccatag tt
//