LOCUS AK290228 4168 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76778 complete cds, highly similar to Homo
sapiens son of sevenless homolog 1 (Drosophila) (SOS1), mRNA.
ACCESSION AK290228
VERSION AK290228.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4168)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..4168
/clone="BRTHA3025775"
/clone_lib="BRTHA3"
/db_xref="H-InvDB:HIT000423025"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 88..4089
/codon_start=1
/note="highly similar to Homo sapiens son of sevenless
homolog 1 (Drosophila) (SOS1), mRNA"
/protein_id="BAF82917.1"
/transl_table=1
/translation="MQAQQLPYEFFSEENAPKWRGLLVPALKKVQGQVHPTLESNDDA
LQYVEELILQLLNMLCQAQPRSASDVEERVQKSFPHPIDKWAIADAQSAIEKRKRRNP
LSLPVEKIHPLLKEVLGYKIDHQVSVYIVAVLEYISADILKLVGNYVRNIRHYEITKQ
DIKVAMCADKVLMDMFHQDVEDINILSLTDEEPSTSGEQTYYDLVKAFMAEIRQYIRE
LNLIIKVFREPFVSNSKLFSANDVENIFSRIVDIHELSVKLLGHIEDTVEMTDEGSPH
PLVGSCFEDLAEELAFDPYESYARDILRPGFHDRFLSQLSKPGAALYLQSIGEGFKEA
VQYVLPRLLLAPVYHCLHYFELLKQLEEKSEDQEDKECLKQAITALLNVQSGMEKICS
KSLAKRRLSESACRFYSQQMKGKQLAIKKMNEIQKNIDGWEGKDIGQCCNEFIMEGTL
TRVGAKHERHIFLFDGLMICCKSNHGQPRLPGASNAEYRLKEKFFMRKVQINDKDDTN
EYKHAFEIILKDENSVIFSAKSAEEKNNWMAALISLQYRSTLERMLDVTMLQEEKEEQ
MRLPSADVYRFAEPDSEENIIFEENMQPKAGIPIIKAGTVIKLIERLTYHMYADPNFV
RTFLTTYRSFCKPQELLSLIIERFEIPEPEPTEADRIAIENGDQPLSAELKRFRKEYI
QPVQLRVLNVCRHWVEHHFYDFERDAYLLQRMEEFIGTVRGKAMKKWVESITKIIQRK
KIARDNGPGHNITFQSSPPTVEWHISRPGHIETFDLLTLHPIEIARQLTLLESDLYRA
VQPSELVGSVWTKEDKEINSPNLLKMIRHTTNLTLWFEKCIVETENLEERVAVVSRII
EILQVFQELNNFNGVLEVVSAMNSSPVYRLDHTFEQIPSRQKKILEEAHELSEDHYKK
YLAKLRSINPPCVPFFGIYLTNILKTEEGNPEVLKRHGKELINFSKRRKVAEITGEIQ
QYQNQPYCLRVESDIKRFFENLNPMGNSMEKEFTDYLFNKSLEIEPRNPKPLPRFPKK
YSYPLKSPGVRPSNPRPGTMRHPTPLQQEPRKISYSRIPESETESTASAPNSPRTPLT
PPPASGASSTTDVCSVFDSDHSSPFHSSNDTVFIQVTLPHGPRSASVSSISLTKGTDE
VPVPPPVPPRRRPESAPAESSPSKIMSKHLDSPPAIPPRQPTSKAYSPRYSISDRTSI
SDPPESPPLLPPREPVRTPDVFSSSPLHLQPPPLGKKSDHGNAFFPNSPSPFTPPPPQ
TPSPHGTRRHLPSPPLTQEVDLHSIAGPPVPPRQSTSQHIPKLPPKTYKREHTHPSMH
RDGPPLLENAHSS"
BASE COUNT 1372 a 883 c 828 g 1085 t
ORIGIN
1 agtagcgagc aggttcagtt cgctagtagg aagctccagc gctacaccgc cgcccctctc
61 cccgcccaga ggcgccccgg gggcaccatg caggcgcagc agctgcccta cgagtttttc
121 agcgaagaga acgcgcccaa gtggcgggga ctactggtgc ctgcgctgaa aaaggtccag
181 gggcaagttc atcctactct cgagtctaat gatgatgctc ttcagtatgt tgaagaatta
241 attttgcaat tattaaatat gctatgccaa gctcagcccc gaagtgcttc agatgtagag
301 gaacgtgttc aaaaaagttt ccctcatcca attgataaat gggcaatagc tgatgcccaa
361 tcagctattg aaaagaggaa gcgaagaaac cctttatctc tcccagtaga aaaaattcat
421 cctttattaa aggaggtcct aggttataaa attgaccacc aggtttctgt ttacatagta
481 gcagtcttag aatacatttc tgcagacatt ttaaagctgg ttgggaatta tgtaagaaat
541 atacggcatt atgaaattac aaaacaagat attaaagtgg caatgtgtgc tgacaaggta
601 ttgatggata tgtttcatca agatgtagaa gatattaata tattatcttt aactgacgaa
661 gagccttcca cctcaggaga acaaacttac tatgatttgg taaaagcatt tatggcagaa
721 attcgacaat atataaggga actaaatcta attataaaag tttttagaga gccctttgtc
781 tccaattcaa aattgttttc agctaatgat gtagaaaata tatttagtcg catagtagat
841 atacatgaac ttagtgtaaa gttactgggc catatagaag atacagtaga aatgacagat
901 gaaggcagtc cccatccact agtaggaagc tgctttgaag acttagcaga ggaactggca
961 tttgatccat atgaatcgta tgctcgagat attttgcgac ctggttttca tgatcgtttc
1021 cttagtcagt tatcaaagcc tggggcagca ctttatttgc agtcaatagg cgaaggtttc
1081 aaagaagctg ttcaatatgt tttacccagg ctgcttctgg cccctgttta ccactgtctc
1141 cattactttg aacttttgaa gcagttagaa gaaaaaagtg aagatcaaga agacaaggaa
1201 tgtttaaaac aagcaataac agctttgctt aatgttcaga gtggtatgga aaaaatatgt
1261 tctaaaagtc ttgcaaaacg aagactgagt gaatctgcat gtcggtttta tagtcagcaa
1321 atgaagggga aacaactagc aatcaagaag atgaacgaga ttcagaagaa tattgatggt
1381 tgggagggaa aagacattgg acagtgttgt aatgaattta taatggaagg aactcttaca
1441 cgtgtaggag ccaaacatga gagacacata tttctctttg atggcttaat gatttgctgt
1501 aaatcaaatc atgggcagcc aagacttcct ggtgctagca atgcagaata tcgtcttaaa
1561 gaaaagtttt ttatgcgaaa ggtacaaatt aatgataaag atgacaccaa tgaatacaag
1621 catgcttttg aaataatttt aaaagatgaa aatagtgtta tattttctgc caagtcagct
1681 gaagagaaaa acaattggat ggcagcattg atatctttac agtaccggag tacactggaa
1741 aggatgcttg atgtaacaat gctacaggaa gagaaagagg agcagatgag gctgcctagt
1801 gctgatgttt atagatttgc agagcctgac tctgaagaga atattatatt tgaagagaac
1861 atgcagccca aggctggaat tccaattatc aaagcaggaa ctgttattaa acttatagag
1921 aggcttacgt accatatgta cgcagatccc aattttgttc ggacatttct tacaacatac
1981 agatcctttt gcaaacctca agaactactg agtcttataa tagaaaggtt tgaaattcca
2041 gagcctgagc caacagaagc tgatcgcata gctatagaga atggagatca acccttgagt
2101 gcagaactga aaagatttag aaaagaatat atacagcctg tgcaactgcg agtattaaat
2161 gtatgtcggc actgggtaga gcaccacttc tatgattttg aaagagatgc atatcttttg
2221 caacgaatgg aagaatttat tggaacagta agaggtaaag caatgaaaaa atgggttgaa
2281 tccatcacta aaataatcca aaggaaaaaa attgcaagag acaatggacc aggtcataat
2341 attacatttc agagttcacc tcccacagtt gagtggcata taagcagacc tgggcacata
2401 gagacttttg acctgctcac cttacaccca atagaaattg ctcgacaact cactttactt
2461 gaatcagatc tataccgagc tgtacagcca tcagaattag ttggaagtgt gtggacaaaa
2521 gaagacaaag aaattaactc tcctaatctt ctgaaaatga ttcgacatac caccaacctc
2581 actctgtggt ttgagaaatg tattgtagaa actgaaaatt tagaagaaag agtagctgtg
2641 gtgagtcgaa ttattgagat tctacaagtc tttcaagagt tgaacaactt taatggtgtc
2701 cttgaggttg tcagtgctat gaattcatca cctgtttaca gactagacca cacatttgag
2761 caaataccaa gtcgccagaa gaaaatttta gaagaagctc atgaattgag tgaagatcac
2821 tataagaaat atttggcaaa actcaggtct attaatccgc catgtgtgcc tttctttgga
2881 atttatctca ctaatatctt gaaaacagaa gaaggcaacc ctgaggtcct aaaaagacat
2941 ggaaaagagc ttataaactt tagcaaaagg aggaaagtag cagaaataac aggagagatc
3001 cagcagtacc aaaatcagcc ttactgttta cgagtagaat cagatatcaa aaggttcttt
3061 gaaaacttga atccgatggg aaatagcatg gagaaggaat ttacagatta tcttttcaac
3121 aaatccctag aaatagaacc acgaaaccct aagcctctcc caagatttcc aaaaaaatat
3181 agctatcccc taaaatctcc tggtgttcgt ccatcaaacc caagaccagg taccatgagg
3241 catcccacac ctctgcagca ggagccaagg aaaattagtt atagtaggat ccctgaaagt
3301 gaaacagaaa gtacagcatc tgcaccaaat tctccaagaa caccgttaac acctccgcct
3361 gcttctggtg cttccagtac cacagatgtt tgcagtgtat ttgattccga tcattcgagc
3421 ccttttcact caagcaatga taccgtcttt atccaagtta ctctgcccca tggcccaaga
3481 tctgcttctg tatcatctat aagtttaacc aaaggcactg atgaagtgcc tgtccctcct
3541 cctgttcctc cacgaagacg accagaatct gccccagcag aatcttcacc atctaagatt
3601 atgtctaagc atttggacag tcccccagcc attcctccta ggcaacctac atcaaaagcc
3661 tattcaccac gatattcaat atcagaccgg acctctatct cagaccctcc tgaaagccct
3721 cccttattac caccacgaga acctgtgagg acacctgatg ttttctcaag ctcaccacta
3781 catctccaac ctcccccttt gggcaaaaaa agtgaccatg gcaatgcctt cttcccaaac
3841 agcccttccc cctttacacc acctcctcct caaacacctt ctcctcacgg cacaagaagg
3901 catctgccat caccaccatt gacacaagaa gtggaccttc attccattgc tgggccgcct
3961 gttcctccac gacaaagcac ttctcaacat atccctaaac tccctccaaa aacttacaaa
4021 agggagcaca cacacccatc catgcacaga gatggaccac cactgttgga gaatgcccat
4081 tcttcctgag ttcctctgta ctgggatgta tattttccta gccccaaatc cattgctggc
4141 aatggatgca ctgaatgtgc cagcactg
//