LOCUS AK290218 2058 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78570 complete cds.
ACCESSION AK290218
VERSION AK290218.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2058)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2058
/clone="BRTHA3021547"
/clone_lib="BRTHA3"
/db_xref="H-InvDB:HIT000423015"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 586..1509
/codon_start=1
/protein_id="BAF82907.1"
/transl_table=1
/translation="MNSWMPRGAPGRMWSACSSSTTPPCPRTSISPQRTGQKLWGCFW
EQWCRSSSAWMPRSAAGRKVKKEPGLAAEVGSALKAETPNNWNATEDQHEPTKPLVRR
AGAKSRSRRKKQKKNSRQEAVPWKKPKGINSNSTANLEDPEVGDAESMAISEPIKGSR
KPCVNKEELALKKPMAKCAWKGPREPPQDARAEAESPGGASESDQDGGHESPPKKKAV
AWVSAKNPAPMRKKKKVSLGPVSYVLVDSEDGRKKPVMPKKGPGSRREASDQKAPRGQ
QPAEATASTSRGPKAKPEGSPRRATNESRKV"
BASE COUNT 487 a 543 c 614 g 414 t
ORIGIN
1 atcgagtctg gacgccccgt gacccgcctg ggccggagcg agggcggacg gcgccttctt
61 ggccctttct gcctctagca gcggcgccgg ggtagccgga gccagcgact gggaaacggc
121 tgcattccac tgcgtctcct tggcctggct gggcggtcgg aggctggtct gccaagatta
181 ctgtttggag accgctgcag cccacgtcca cctgatagac tatttactac acatagtaga
241 ttcagagccg ctaaatgtcc aagaccatgg cgatgaacct tctggaggat tggtgcaggg
301 gaatggaagt ggacatccac aggtccttgt tggtcacagg catcccagag gactgtgggc
361 aggcagaaat tgaggagacc ttgaatgggg tcctctcccc actgggcccg taccgcgtgc
421 tcaacaagat ttttgtgagg gaagagaatg ttaaagctgc cctcattgag gttggtgaag
481 gtgtgaatct gagcaccatc ccccgtgaat tcccaggaag gggtggtgtc tggagagtgg
541 tctgtagaga ccctacccag gatgccgagt ttttaaaaaa tctgaatgaa ttcctggatg
601 ccgaggggcg cacctgggag gatgtggtcc gcctgctcca gctcaaccac cccaccctgt
661 cccagaacca gcatcagccc ccagagaact gggcagaagc tctgggggtg cttctgggag
721 cagtggtgca gatcatcttc tgcatggatg ccgagatccg cagccgggag gaaggtgaag
781 aaagaaccgg ggcttgcagc agaggtgggt tctgccttaa aggcagagac ccccaacaac
841 tggaatgcca cggaagacca gcatgagcct accaaacctt tggttcgcag ggctggagct
901 aagtctcgct ccaggagaaa gaagcagaag aagaactcca ggcaggaagc agtgccctgg
961 aaaaaaccca aaggcatcaa ttccaacagc acagctaact tggaggatcc tgaggtgggt
1021 gatgctgaaa gcatggcgat ctcagagccg atcaagggca gcagaaagcc ctgtgtgaat
1081 aaggaggagt tggctttgaa gaagcccatg gcgaaatgtg cctggaaggg tcccagagag
1141 ccacctcagg atgcccgggc agaagccgag agcccaggag gcgcctctga gtcagaccaa
1201 gatggtggcc atgaaagccc accaaagaag aaggccgtgg cctgggtgtc tgccaagaac
1261 cccgctccca tgaggaagaa gaagaaggtg agcttgggcc ctgtctccta cgtcttggtt
1321 gactcagaag atggcaggaa gaagccggtg atgccaaaga aagggccagg ctcaagaagg
1381 gaggcatcag atcagaaggc ccctcggggc cagcagcctg ccgaggcaac agcctcaacc
1441 tctaggggtc cgaaggccaa gccagaaggc tctcctcggc gtgccaccaa tgaatccaga
1501 aaggtttgat ctgggggacc acccatactg aggagttgaa agaacaagga agacgtacca
1561 agtcaaccaa gttctctctt gtcactgaat aagactttgg actctcttag ggcccctgtt
1621 gatagagatc tggccctgag gtaaacgata ggtgaggtct tgggtgggag ggagttgggg
1681 aagggaggtg gatctctatg cccttttctc taccaggcct gccgtttcac cgccttctct
1741 actcaccttc tcttcggagg caggagagtt ggtaagagga ttgggaaaat tctagaacat
1801 tcattcccct ttatgcatga gcagggtcac tgttacactc atccatgttc agcttttctc
1861 ccccacgcct tgctccctcc tcggaatggt cagcgacctc tgcaggccct ggcatttgga
1921 agagctgggt ggccctgcca tattcttcct cccgccttcc tcttgtgtaa ccagcggggt
1981 aagttaagcc aggaccttcg ctgcaaacct ggttttattg ctccttcagt ctccagcttc
2041 catcctccag ttatctag
//