LOCUS AK290185 2388 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76774 complete cds, highly similar to Homo
sapiens spastic paraplegia 3A (autosomal dominant) (SPG3A),mRNA.
ACCESSION AK290185
VERSION AK290185.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2388)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2388
/clone="BRTHA3009213"
/clone_lib="BRTHA3"
/db_xref="H-InvDB:HIT000422982"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 155..1831
/codon_start=1
/note="highly similar to Homo sapiens spastic paraplegia
3A (autosomal dominant) (SPG3A),mRNA"
/protein_id="BAF82874.1"
/transl_table=1
/translation="MAKNRRDRNSWGGFSEKTYEWSSEEEEPVKKAGPVQVLIVKDDH
SFELDETALNRILLSEAVRDKEVVAVSVAGAFRKGKSFLMDFMLRYMYNQESVDWVGD
YNEPLTGFSWRGGSERETTGIQIWSEIFLINKPDGKKVAVLLMDTQGTFDSQSTLRDS
ATVFALSTMISSIQVYNLSQNVQEDDLQHLQLFTEYGRLAMEETFLKPFQSLIFLVRD
WSFPYEFSYGADGGAKFLEKRLKVSGNQHEELQNVRKHIHSCFTNISCFLLPHPGLKV
ATNPNFDGKLKEIDDEFIKNLKILIPWLLSPESLDIKEINGNKITCRGLVEYFKAYIK
IYQGEELPHPKSMLQATAEANNLAAVATAKDTYNKKMEEICGGDKPFLAPNDLQTKHL
QLKEESVKLFRGVKKMGGEEFSRRYLQQLESEIDELYIQYIKHNDSKNIFHAARTPAT
LFVVIFITYVIAGVTGFIGLDIIASLCNMIMGLTLITLCTWAYIRYSGEYRELGAVID
QVAAALWDQGSTNEALYKLYSAAATHRHLYHQAFPTPKSESTEQSEKKKM"
BASE COUNT 751 a 491 c 500 g 646 t
ORIGIN
1 actccttccc accagcgcca cagcaacatc ctcagagtct gagcgaactg cgcccagcgc
61 gggcacggag cctcccaccg ccagcaacct gcggcctcgg agaaggcagc gagcgcagtg
121 acagcgcctc accgccacca gctcctggac caccatggcc aagaaccgca gggacagaaa
181 cagttggggt ggattttcgg aaaagacata tgaatggagc tcagaagagg aggagccagt
241 gaaaaaggca ggaccagtcc aagtcctcat tgtcaaagat gaccattcct ttgagttaga
301 tgaaactgca ttaaatcgga tccttctctc ggaggctgtc agagacaagg aggttgttgc
361 tgtatctgtt gctggagcat ttagaaaagg aaaatcattc ctgatggact tcatgttgag
421 atacatgtac aaccaggaat cagttgattg ggttggagac tacaatgaac cattgactgg
481 tttttcatgg agaggtggat ctgagcgaga gaccacagga attcagatat ggagtgaaat
541 cttccttatc aataaacctg atggtaaaaa ggttgcagtg ttattgatgg atactcaggg
601 aacctttgat agtcagtcaa ctttgagaga ttcagccaca gtatttgccc ttagcacaat
661 gatcagctca atacaggtat ataacttatc ccaaaatgtc caggaggatg atcttcagca
721 cctccagctt ttcactgagt atggcagact ggcaatggag gaaacattcc tgaagccatt
781 tcagagtctg atatttcttg ttcgagactg gagtttccca tacgaatttt catatggagc
841 cgatggtggt gccaaattct tggaaaaacg cctcaaggtc tcagggaacc agcatgaaga
901 actacagaac gtcagaaaac acatccattc ctgtttcacc aacatttcct gttttctgct
961 acctcatcct ggcttaaaag tagctaccaa tccaaacttt gatggaaaat tgaaagaaat
1021 agatgatgaa ttcatcaaaa acttgaaaat actgattcct tggctactta gtcccgagag
1081 cctagatatt aaagagatca atgggaataa aatcacctgc cggggtctgg tggagtactt
1141 caaggcttat ataaagatct atcaaggtga agaattacca catcccaaat ccatgttaca
1201 ggccacagca gaagctaaca atttagcagc cgtggcaact gccaaggaca catacaacaa
1261 aaaaatggaa gagatttgtg gtggtgacaa accatttctg gccccaaatg acttgcagac
1321 caaacacctg caacttaagg aagaatctgt gaagctattc cgaggggtga agaagatggg
1381 tggggaagaa tttagccggc gttacctgca gcagttggag agtgaaatag atgaacttta
1441 catccaatat atcaagcaca atgatagcaa aaatatcttc catgcagctc gtaccccagc
1501 cacactgttt gtagtcatct ttatcacata tgtgattgct ggtgtgactg gattcattgg
1561 tttggacatc atagctagcc tatgcaatat gataatggga ctgaccctta tcaccctgtg
1621 cacttgggca tatatccggt actctggaga ataccgagag ctgggagctg taatagacca
1681 ggtggctgca gctctgtggg accagggaag tacaaatgag gctttgtaca agctttacag
1741 tgcagcagca acccacagac atctgtatca tcaagctttc cctacaccaa agtcggaatc
1801 tactgaacaa tcagaaaaga aaaaaatgta atgcaaattt taagaaatac aggtgcatga
1861 ccaattgtca attaaatatt cagttttatg tctccatgca aacattcaaa gtgcttccat
1921 cagaacggag taaaatacta aacacctctg aagactgcaa actggattag ttcttttact
1981 tcagtgttta ataagcagat gtatgtatgc atggttatac tattttgtta acatgtacaa
2041 tttcctgatt tttcttcaaa aatgctgtta taaagtattt gtctatttat gataacagta
2101 cacgtgttct gcttgaattt actaaattct actactgggt tataattaaa tcatgtgata
2161 ttccacgttt ggatatgctc atttaatttc tacagaaaaa attttaaatt atttcacatt
2221 agccatttgt taaaacacag catcataact cagcaggctg gatttaatct gtatcatctt
2281 atatatatca caatcttatt tttaagcaca ttttagagtt ccttagttgc tttatcaaaa
2341 accagatatt gcttttacat ggtttaatag aatataaacc tcttgata
//