LOCUS AK290156 2249 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77924 complete cds, highly similar to Homo
sapiens GLI-Kruppel family member HKR3, mRNA.
ACCESSION AK290156
VERSION AK290156.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2249)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2249
/clone="BRTHA2037123"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000422953"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 124..2190
/codon_start=1
/note="highly similar to Homo sapiens GLI-Kruppel family
member HKR3, mRNA"
/protein_id="BAF82845.1"
/transl_table=1
/translation="MDGSFVQHSVRVLQELNKQREKGQYCDATLDVGGLVFKAHWSVL
ACCSHFFQSLYGDGSGGSVVLPAGFAEIFGLLLDFFYTGHLALTSGNRDQVLLAAREL
RVPEAVELCQSFKPKTSVGQAAGGQSGLGPPASQNVNSHVKEPAGLEEEEVSRTLGLV
PRDQEPRGSHSPQRPQLHSPAQSEGPSSLCGKLKQALKPCPLEDKKPEDCKVPPRPLE
AEGAQLQGGSNEWEVVVQVEDDGDGDYMSEPEAVLTRRKSNVIRKPCAAEPALSAGSL
AAEPAEYRKGTAVPVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENL
LEHEARNCMNRSEQVFTCSVCQETFRRRMELRVHMVSHTGEMPYKCSSCSQQFMQKKD
LQSHMIKLHGAPKPHACPTCAKCFLSRTELQLHEAFKHRGEKLFVCEECGHRASSRNG
LQMHIKAKHRNERPHVCEFCSHAFTQKANLNMHLRTHTGEKPFQCHLCGKTFRTQASL
DKHNRTHTGERPFSCEFCEQRFTEKGPLLRHVASRHQEGRPHFCQICGKTFKAVEQLR
VHVRRHKGVRKFECTECGYKFTRQAHLRRHMEIHDRVENYNPRQRKLRNLIIEDEKMV
VVALQPPAELEVGSAEVIVESLAQGGLASQLPGQRLCAEESFTGPGVLEPSLIITAAV
PEDCDT"
BASE COUNT 489 a 656 c 686 g 418 t
ORIGIN
1 gctttgacgt cacgtccggc gcggagacgg tggagtctcc gcactgtcgg cggggagctt
61 tctcttgcat accctcgctt aggctggccg gggtgtcact tctgcctccc tgccctccag
121 accatggacg gctccttcgt ccagcacagt gtgagggttc tgcaggagct caacaagcag
181 cgggagaagg gccagtactg cgacgccact ctggacgtgg ggggcctggt gtttaaggca
241 cactggagtg tccttgcctg ctgcagtcac tttttccaga gcctctacgg ggatggctca
301 gggggcagtg tcgtcctccc tgctggcttc gctgagatct ttggcctctt gttggacttt
361 ttctacactg gtcacctcgc tctcacctca gggaaccggg atcaggtgct cctggcagcc
421 agggagttgc gagtgccaga ggccgtagag ctgtgccaga gcttcaagcc caaaacttca
481 gtgggacagg cagcaggtgg ccagagtggg ctggggcccc ctgcctccca gaatgtgaac
541 agccacgtca aggagccggc aggcttggaa gaagaggaag tttcgaggac tctgggtcta
601 gtccccaggg atcaggagcc cagaggcagt catagtcctc agaggcccca gctccattcc
661 ccagctcaga gtgagggccc ctcctccctc tgtgggaaac tgaagcaggc cttgaagcct
721 tgtccccttg aggacaagaa acccgaggac tgcaaagtgc ccccaaggcc cttagaggct
781 gaaggtgccc agctgcaggg cggcagtaat gagtgggaag tggtggttca agtggaggat
841 gatggggatg gcgattacat gtctgagcct gaggctgtgc tgaccaggag gaagtcaaat
901 gtaatccgaa agccctgtgc agctgagcca gccttgagcg cgggctccct agcagctgag
961 cctgctgagt acagaaaagg tacagcggtg ccggtcgaat gccccacatg tcataaaaag
1021 ttcctcagca aatattatct aaaagtccac aacaggaaac atactgggga gaaacccttt
1081 gagtgtccca aatgtgggaa gtgttacttt cggaaggaga acctcctgga gcatgaagcc
1141 cggaattgca tgaaccgctc ggaacaggtc ttcacgtgct ctgtgtgcca ggagacattc
1201 cgccgaagga tggagctgcg ggtgcacatg gtgtctcaca caggggagat gccctacaag
1261 tgttcctcct gctcccagca gttcatgcag aagaaggact tgcagagcca catgatcaaa
1321 cttcatggag cccccaagcc ccatgcatgc cccacctgtg ccaagtgctt cctgtctcgg
1381 acagagctgc agctgcatga agctttcaag caccgtggtg agaagctgtt tgtgtgtgag
1441 gagtgtgggc accgggcctc gagccggaat ggcctgcaga tgcacatcaa ggccaagcac
1501 aggaatgaga ggccacacgt atgtgagttc tgcagccacg ccttcaccca aaaggccaat
1561 ctcaacatgc acctgcgcac acacacgggt gagaagccct tccagtgcca cctctgtggc
1621 aagaccttcc gaacccaagc cagcctggac aagcacaacc gcacccacac cggggaaagg
1681 cccttcagtt gcgagttctg tgaacagcgc ttcactgaga aggggcccct cctgaggcac
1741 gtggccagcc gccatcagga gggccggccc cacttctgcc agatatgcgg caagaccttc
1801 aaagccgtgg agcaactgcg tgtgcacgtc agacggcaca agggggtgag gaagtttgag
1861 tgcaccgagt gtggctacaa gtttacccga caggcccacc tgcggaggca catggagatc
1921 cacgaccggg tagagaacta caacccgcgg cagcgcaagc tccgcaacct gatcatcgag
1981 gacgagaaga tggtggtggt ggcgctgcag ccgcctgcag agctggaggt gggctcggcg
2041 gaggtcattg tggagtccct ggcccagggc ggcctggcct cccagctccc cggccagaga
2101 ctgtgtgcag aggagagctt caccggccca ggtgtcctgg agccctccct catcatcaca
2161 gctgctgtcc ccgaggactg tgacacatag cccattctgg ccaccagagc ccacttggcc
2221 ccacccctca ataaaccgtg tggctttgg
//