LOCUS AK290144 2397 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76769 complete cds, highly similar to Homo
sapiens glypican 6 (GPC6), mRNA.
ACCESSION AK290144
VERSION AK290144.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2397)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2397
/clone="BRTHA2030472"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000422941"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 154..1821
/codon_start=1
/note="highly similar to Homo sapiens glypican 6 (GPC6),
mRNA"
/protein_id="BAF82833.1"
/transl_table=1
/translation="MPSWIGAVILPLLGPLLSLPAGADVKARSCGEVRQAYGAKGFSL
ADIPYQEIAGEHLRICPQEYTCCTTEMEDKLSQQSKLEFENLVEETSHFVRTTFVSRH
KKFDEFFRELLENAEKSLNDMFVRTYGMLYMQNSEVFQDLFTELKRYYTGGNVNLEEM
LNDFWARLLERMFQLINPQYHFSEDYLECVSKYTDQLKPFGDVPRKLKIQVTRAFIAA
RTFVQGLTVGREVANRVSKVSPTPGCIRALMKMLYCPYCRGLPTVRPCNNYCLNVMKG
CLANQADLDTEWNLFIDAMLLVAERLEGPFNIESVMDPIDVKISEAIMNMQENSMQVS
AKVFQGCGQPKPAPALRSARSAPENFNTRFRPYNPEERPTTAAGTSLDRLVTDIKEKL
KLSKKVWSALPYTICKDESMTAGTSNEEECWNGHSKARYLPEIMNDGLTNQINNPEVD
VDITRPDTFIRQQIMALRVMTNKLKNAYNGNDVNFQDTSDESSGSGSGSGCMDDVCPT
EFEFVTTEAPAVDPDRREVDSSAAQRGHSLLSWSLTCIVLALQRLCR"
BASE COUNT 634 a 576 c 606 g 581 t
ORIGIN
1 gctgcgctgc tcgtcccctc ggctggcaga agggggtgac gctgggcagc ggcgaggagc
61 gcgccgctgc ctctggcggg ctttcggctt gaggggcaag gtgaagagcg caccggccgt
121 ggggtttacc gagctggatt tgtatgttgc accatgcctt cttggatcgg ggctgtgatt
181 cttcccctct tggggccgct gctctccctc cccgccgggg cggatgtgaa ggctcggagc
241 tgcggagagg tccgccaggc gtacggtgcc aagggattca gcctggcgga catcccctac
301 caggagatcg caggggaaca cttaagaatc tgtcctcagg aatatacatg ctgcaccaca
361 gaaatggaag acaagttaag ccaacaaagc aaactcgaat ttgaaaacct tgtggaagag
421 acaagccatt ttgtgcgcac cacttttgtg tccaggcata agaaatttga cgaatttttc
481 cgagagctcc tggagaatgc agaaaagtca ctaaatgata tgtttgtacg gacctatggc
541 atgctgtaca tgcagaattc agaagtcttc caggacctct tcacagagct gaaaaggtac
601 tacactgggg gtaatgtgaa tctggaggaa atgctcaatg acttttgggc tcggctcctg
661 gaacggatgt ttcagctgat aaaccctcag tatcacttca gtgaagacta cctggaatgt
721 gtgagcaaat acactgacca gctcaagcca tttggagacg tgccccggaa actgaagatt
781 caggttaccc gcgccttcat tgctgccagg acctttgtcc aggggctgac tgtgggcaga
841 gaagttgcaa accgagtttc caaggtcagc ccaaccccag ggtgtatccg tgccctcatg
901 aagatgctgt actgcccata ctgtcggggg cttcccactg tgaggccctg caacaactac
961 tgtctcaacg tcatgaaggg ctgcttggca aatcaggctg acctcgacac agagtggaat
1021 ctgtttatag atgcaatgct cttggtggca gagcgactgg aggggccatt caacattgag
1081 tcggtcatgg acccgataga tgtcaagatt tctgaagcca ttatgaacat gcaagaaaac
1141 agcatgcagg tgtctgcaaa ggtctttcag ggatgtggtc agcccaaacc tgctccagcc
1201 ctcagatctg cccgctcagc tcctgaaaat tttaatacac gtttcaggcc ctacaatcct
1261 gaggaaagac caacaactgc tgcaggcaca agcttggacc ggctggtcac agacataaaa
1321 gagaaattga agctctctaa aaaggtctgg tcagcattac cctacactat ctgcaaggac
1381 gagagcatga cagcgggcac gtccaacgag gaggaatgct ggaacgggca cagcaaagcc
1441 agatacttgc ctgagatcat gaatgatggg ctcaccaacc agatcaacaa tcccgaggtg
1501 gatgtggaca tcactcggcc tgacactttc atcagacagc agattatggc tctccgtgtg
1561 atgaccaaca aactaaaaaa cgcctacaat ggcaatgatg tcaatttcca ggacacaagt
1621 gatgaatcca gtggctcagg gagtggcagt gggtgcatgg atgacgtgtg tcccacggag
1681 tttgagtttg tcaccacaga ggcccccgca gtggatcccg accggagaga ggtggactct
1741 tctgcagccc agcgtggcca ctccctgctc tcctggtctc tcacctgcat tgtcctggca
1801 ctgcagagac tgtgcagata atcttgggtt tttggtcaga tgaaactgca ttttagctat
1861 ctgaatggcc aactcacttc ttttcttaca ctcttggaca atggaccatg ccacaaaaac
1921 ttaccgtttt ctatgagaag agagcagtaa tgcaatctgc ctcccttttt gttttcccaa
1981 agagtaccgg gtgccagact gaactgcttc ctctttcctt cagctatctg tggggacctt
2041 gtttattcta gagagaattc ttactcaaat ttttcgtacc aggagatttt cttaccttca
2101 tttgctttta tgctgcagaa gtaaaggaat ctcacgttgt gagggttttt tttttttctc
2161 atttaaaata aaaaaggaag aaagaaaata attttccttg taaaatcggg ccaaacccca
2221 agacagctac attttcaaca aaaaagcaaa cagagaaaaa taaatgaact ttaacactgt
2281 aagttcagca ttgacagcca acttccagtg taagcttttt tgtgacaaat ccgggtttaa
2341 aaatgcttat ggggagaaag cttaaagttt gttctaaatg tagtgaaaat gcactgt
//