LOCUS AK290141 1933 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78317 complete cds, highly similar to Homo
sapiens staufen, RNA binding protein, homolog 2 (Drosophila)
(STAU2), mRNA.
ACCESSION AK290141
VERSION AK290141.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1933)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1933
/clone="BRTHA2029045"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000422938"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 371..1810
/codon_start=1
/note="highly similar to Homo sapiens staufen, RNA
binding protein, homolog 2 (Drosophila) (STAU2), mRNA"
/protein_id="BAF82830.1"
/transl_table=1
/translation="MLQINQMFSVQLSLGEQTWESEGSSIKKAQQAVANKALTESTLP
KPVQKPPKSNVNNNPGSITPTVELNGLAMKRGEPAIYRPLDPKPFPNYRANYNFRGMY
NQRYHCPVPKIFYVQLTVGNNEFFGEGKTRQAARHNAAMKALQALQNEPIPERSPQNG
ESGKDMDDDKDANKSEISLVFEIALKRNMPVSFEVIKESGPPHMKSFVTRVSVGEFSA
EGEGNSKKLSKKRAATTVLQELKKLPPLPVVEKPKLFFKKRPKTIVKAGPEYGQGMNP
ISRLAQIQQAKKEKEPDYVLLSERGMPRRREFVMQVKVGNEVATGTGPNKKIAKKNAA
GAMLLQLGYKASTNLQDQLEKTGENKGWSGPKPGFPEPTNNTPKGILHLSPDVYQGME
ASRHKVISGTTLGYLSPKDMNQPSSSFFSISPTSNSSATIARELLMNGTSSTAEAIGL
KGSSPTPPCSPVQPSKQLEYLARIQGFQV"
BASE COUNT 603 a 425 c 437 g 468 t
ORIGIN
1 actcttgcct cataaatcta ggattcaggg cattgttttc aatggttctc atttttggct
61 ccaaggattc tttttcatgt gactaatatt ttcggtagaa gaggaggtct ggccacgccg
121 cgggtcttgg cgagcaggtg atcacggatc cctggtgttt gctgggcgag acggtgaagc
181 aacctcctcc ccgccccctc ccccgtctag aaaggtgcaa gatccgctaa accgtgcgtt
241 gcacagcggc ggccggagca gacgcgggat ggtcgcgcgt cccctgcaca gcacagaggg
301 gcagccggag agcctgggaa agtttttgga gccgtgaggg atacagcagt ttggtcaata
361 ttgtcttaac atgcttcaaa taaatcagat gttctcagtg cagctgagtc ttggtgagca
421 gacatgggaa tccgaaggca gcagtataaa gaaggctcag caggctgttg ccaataaagc
481 tttgactgaa tctacgcttc ccaaaccagt tcagaaacca cccaaaagta atgttaacaa
541 taacccaggc agtataactc caactgtgga actgaatggg cttgctatga aaaggggaga
601 gcctgccatc tacaggccat tagatccaaa gccattccca aattatagag ctaattacaa
661 ctttcggggc atgtacaatc agaggtatca ttgcccagtg cctaagatct tttatgttca
721 gctcactgta ggaaataatg aattttttgg ggaaggaaag actcgacaag ctgctagaca
781 caatgctgca atgaaagccc tccaagcact gcagaatgaa cctattccag aaagatctcc
841 tcagaatggt gaatcaggaa aggatatgga tgatgacaaa gatgcaaata agtctgagat
901 cagcttagtg tttgaaattg ctctgaagcg aaatatgcct gtcagttttg aggttattaa
961 agaaagtgga ccaccacata tgaaaagctt tgttactcga gtgtcagtag gagagttctc
1021 tgcagaagga gaaggaaata gcaaaaaact ctccaagaag cgcgctgcga ccaccgtctt
1081 acaggagctt aaaaaacttc cacctcttcc tgtggtggaa aagccaaaac tattttttaa
1141 aaaacgccct aaaacaatag taaaggccgg accagaatat ggccaaggga tgaaccctat
1201 tagccgcctg gcgcaaattc aacaggccaa aaaggaaaag gagccggatt atgttttgct
1261 ttcagaaaga ggaatgcctc gacgtcgaga atttgtgatg caggtgaagg taggcaatga
1321 agttgctaca ggaacaggac ctaataaaaa gatagccaaa aaaaatgctg caggagcaat
1381 gctgttacaa cttggttata aagcatccac taatcttcag gatcaacttg agaagacagg
1441 ggaaaacaaa ggatggagtg gtccaaagcc tgggtttcct gaaccaacaa ataatactcc
1501 aaaaggaatt cttcatttgt ctcctgatgt ttatcaaggg atggaagcca gccgccacaa
1561 agtaatctct ggcactactc taggctattt gtcacccaaa gatatgaacc aaccttcaag
1621 ctctttcttc agtatatctc ccacatcgaa tagttcagct acaattgcca gggaactcct
1681 tatgaatgga acatcttcta cagctgaagc cataggttta aaaggaagtt ctcctactcc
1741 cccttgttct ccagtacaac cttcaaaaca actggaatat ttagcaagga ttcaaggctt
1801 tcaggtatga attaaaagca aaaacaaaaa acaaaacaat tcattagcct cagattcttc
1861 atctgtatac atcacaaggc tcattcttgc ctgctagtat ggcctacatg ccacttacgt
1921 tttaagttat tta
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