LOCUS AK290131 1926 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76233 complete cds, highly similar to Homo
sapiens transcription factor 2, hepatic; LF-B3; variant hepatic
nuclear factor (TCF2), transcript variant a, mRNA.
ACCESSION AK290131
VERSION AK290131.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1926)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1926
/clone="BRTHA2020883"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000422928"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 176..1849
/codon_start=1
/note="highly similar to Homo sapiens transcription
factor 2, hepatic; LF-B3; variant hepatic nuclear factor
(TCF2), transcript variant a, mRNA"
/protein_id="BAF82820.1"
/transl_table=1
/translation="MVSKLTSLQQELLSALLSSGVTKEVLVQALEELLPSPNFGVKLE
TLPLSPGSGAEPDTKPVFHTLTNGHAKGRLSGDEGSEDGDDYDTPPILKELQALNTEE
AAEQRAEVDRMLSEDPWRAAKMIKGYMQQHNIPQREVVDVTGLNQSHLSQHLNKGTPM
KTQKRAALYTWYVRKQREILRQFNQTVQSSGNMTDKSSQDQLLFLFPEFSQQSHGPGQ
SDDACSEPTNKKMRRNRFKWGPASQQILYQAYDRQKNPSKEEREALVEECNRAECLQR
GVSPSKAHGLGSNLVTEVRVYNWFANRRKEEAFRQKLAMDAYSSNQTHSLNPLLSHGS
PHHQPSSSPPNKLSGVRYSQQGNNEITSSSTISHHGNSAMVTSQSVLQQVSPASLDPG
HNLLSPDGKMISVSGGGLPPVSTLTNIHSLSHHNPQQSQNLIMTPLSGVMAIAQSLNT
SQAQSVPVINSVAGSLAALQPVQFSQQLHSPHQQPLMQQSPGSHMAQQPFMAAVTQLQ
NSHMYAHKQEPPQYSHTSRFPSAMVVTDTSSISTLTNMSSSKQCPLQAW"
BASE COUNT 459 a 646 c 477 g 344 t
ORIGIN
1 agaagttttc tgactccttt cggaggagcc tccgggaccc cggggagtaa caggtgtctg
61 gaggctgaag ggtggagggg ttcctggatt tggggtttgc ttgtgaaact cccctccacc
121 ctcctctctc gcacccaccc accccctcac ccccttcttt ttccgtcctt ggaaaatggt
181 gtccaagctc acgtcgctcc agcaagaact cctgagcgcc ctgctgagct ccggggtcac
241 caaggaggtg ctggttcagg ccttggagga gttgctgcca tccccgaact tcggggtgaa
301 gctggagacg ctgcccctgt cccctggcag cggggccgag cccgacacca agccggtctt
361 ccatactctc accaacggcc acgccaaggg ccgcttgtcc ggcgacgagg gctccgagga
421 cggcgacgac tatgacacac ctcccatcct caaggagctg caggcgctca acaccgagga
481 ggcggcggag cagcgggcgg aggtggaccg gatgctcagt gaggaccctt ggagggctgc
541 taaaatgatc aagggttaca tgcagcaaca caacatcccc cagagggagg tggtcgatgt
601 caccggcctg aaccagtcgc acctctccca gcatctcaac aagggcaccc ctatgaagac
661 ccagaagcgt gccgctctgt acacctggta cgtcagaaag caacgagaga tcctccgaca
721 attcaaccag acagtccaga gttctggaaa tatgacagac aaaagcagtc aggatcagct
781 gctgtttctc tttccagagt tcagtcaaca gagccatggg cctgggcagt ccgatgatgc
841 ctgctctgag cccaccaaca agaagatgcg ccgcaaccgg ttcaaatggg ggcccgcgtc
901 ccagcaaatc ttgtaccagg cctacgatcg gcaaaagaac cccagcaagg aagagagaga
961 ggccttagtg gaggaatgca acagggcaga atgtttgcag cgaggggtgt ccccctccaa
1021 agcccacggc ctgggctcca acttggtcac tgaggtccgt gtctacaact ggtttgcaaa
1081 ccgcaggaag gaggaggcat tccggcaaaa gctggccatg gacgcctata gctccaacca
1141 gactcacagc ctgaaccctc tgctctccca cggctccccc caccaccagc ccagctcctc
1201 tcctccaaac aagctgtcag gagtgcgcta cagccagcag ggaaacaatg agatcacttc
1261 ctcctcaaca atcagtcacc atggcaacag cgccatggtg accagccagt cggttttaca
1321 gcaagtctcc ccagccagcc tggacccagg ccacaatctc ctctcacctg atggtaaaat
1381 gatctcagtc tcaggaggag gtttgccccc agtcagcacc ttgacgaata tccacagcct
1441 ctcccaccat aatccccagc aatctcaaaa cctcatcatg acacccctct ctggagtcat
1501 ggcaattgca caaagcctca acacctccca agcacagagt gtccctgtca tcaacagtgt
1561 ggccggcagc ctggcagccc tgcagcccgt ccagttctcc cagcagctgc acagccctca
1621 ccagcagccc ctcatgcagc agagcccagg cagccacatg gcccagcagc ccttcatggc
1681 agctgtgact cagctgcaga actcacacat gtacgcacac aagcaggaac ccccccagta
1741 ttcccacacc tcccggtttc catctgcaat ggtggtcaca gataccagca gcatcagtac
1801 actcaccaac atgtcttcaa gtaaacagtg tcctctacaa gcctggtgat gcccacacac
1861 cacttacttc gtgcgcaaca acaaggaccc tgttttccac accatcaccc tctgggcagc
1921 tgtcat
//