LOCUS AK290127 1608 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76349 complete cds, highly similar to Homo
sapiens U11/U12 snRNP 35K (U1SNRNPBP), transcript variant 1, mRNA.
ACCESSION AK290127
VERSION AK290127.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1608)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1608
/clone="BRTHA2018028"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000422924"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 97..837
/codon_start=1
/note="highly similar to Homo sapiens U11/U12 snRNP 35K
(U1SNRNPBP), transcript variant 1, mRNA"
/protein_id="BAF82816.1"
/transl_table=1
/translation="MNDWMPIAKEYDPLKAGSIDGTDEDPHDRAVWRAMLARYVPNKG
VIGDPLLTLFVARLNLQTKEDKLKEVFSRYGDIRRLRLVRDLVTGFSKGYAFIEYKEE
RAVIKAYRDADGLVIDQHEIFVDYELERTLKGWIPRRLGGGLGGKKESGQLRFGGRDR
PFRKPINLPVVKNDLYREGKRERRERSRSRERHWDSRTRDRDHDRGREKRWQEREPTR
VWPDNDWERERDFRDDRIKGREKKERGK"
BASE COUNT 404 a 361 c 448 g 395 t
ORIGIN
1 aaaaaaggtc aggccgaggc cggcgcggag aatctgctgt cgcctgcagc tgctcgcctg
61 tctccgtcgg aagggagccc aagctttgca gagaacatga acgattggat gcccatcgcc
121 aaggagtatg atccactcaa agcgggcagc attgatggca ccgatgaaga cccacacgac
181 cgcgcggtct ggagggcaat gctggcacga tatgtcccca acaaaggtgt cataggagat
241 cccctcctca ccctgtttgt ggccagacta aacttgcaga ccaaggagga caaattaaag
301 gaagtctttt cccgctatgg tgacatccgg cggcttcggc tggtcaggga cttggtcaca
361 ggtttttcaa agggctacgc cttcatcgaa tacaaggagg agcgtgccgt gatcaaagct
421 taccgagatg ctgatggcct ggttattgac cagcatgaga tatttgtgga ctacgagctg
481 gaaaggactc tcaaagggtg gatccctcgg cgacttggag gcggtcttgg gggaaaaaag
541 gagtctgggc aactgagatt tgggggacgg gaccggcctt ttcgaaaacc tattaacttg
601 ccagttgtta aaaacgacct ctatagagag ggaaaacggg aaaggcggga gcgatctcga
661 tcccgagaaa gacactggga ctcgaggaca agggatcgag accatgacag gggccgggag
721 aagagatggc aagaaagaga gccgaccagg gtgtggcccg acaatgactg ggagagagag
781 agggacttca gagatgacag gatcaagggg agggagaaga aggaaagagg caagtagagg
841 cccaacagca gaaccccaaa gtgaagttac agtggaaatg agtggagggg gattgtcttt
901 caacgcagcg tgagtctaat ggttgaataa aacttactga tgatcatggg gtttggaata
961 gttttctttc caatctggaa cttcggttca agctgatagg aatttatcat cttcctcaca
1021 tagttctaag gacatgttat ttaacaggat caagaagcaa ttttgtagtt actggcatct
1081 gtacagaagg gcattttctt ttcttttctt tttttttttt tgagacagag tctcactctg
1141 ttgccagggc tggagtgcag tggtaaaatc ttggctcact gtaacctctg cctcctgggt
1201 tcaagtgatt ctcctgcctc agcctcccca gtagttggga ttacaggcat gtgccaccat
1261 gcccgactaa tttttgtatt tttagtggag atggggtttc accatgttgg tcgggctgtt
1321 ttcgaactcc tgacctcaga tgatccacct gccttggcct cccaaggtgc tgggattaca
1381 ggtgtgagcc actactcctg gcctggtctc caactcttga cctcaaatga gccacctgcc
1441 ttagcctccc aggtagctga gatcataggt gtacaccacc acacccacct atttttttat
1501 tttaattaat tttttgtaga ggtgggttat tgctatgtca cctgggtttg tcttaagctc
1561 ctgggctcag gtgatcctcc ctacttgacc tcccaaaata tggggatt
//