LOCUS AK290116 2482 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77884 complete cds.
ACCESSION AK290116
VERSION AK290116.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2482)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2482
/clone="BRTHA2005851"
/clone_lib="BRTHA2"
/db_xref="H-InvDB:HIT000422913"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="thalamus"
CDS 162..2168
/codon_start=1
/protein_id="BAF82805.1"
/transl_table=1
/translation="MTERIHSINLHNFSNSVLETLNEQRNRGHFCDVTVRIHGSMLRA
HRCVLAAGSPFFQDKLLLGYSDIEIPSVVSVQSVQKLIDFMYSGVLRVSQSEALQILT
AASILQIKTVIDECTRIVSQNVGDVFPGIQDSGQDTPRGTPESGTSGQSSDTESGYLQ
SHPQHSVDRIYSALYACSMQNGSGERSFYSGAVVSHHETALGLPRDHHMEDPSWITRI
HERSQQMERYLSTTPETTHCRKQPRPVRIQTLVGNIHIKQEMEDDYDYYGQQRVQILE
RNESEECTEDTDQAEGIESEPKGESFDSGVSSSIGTEPDSVEQQFGPGAARDSQAEPT
QPEQAAEAPAEGGPQTNQLETGASSPERSNEVEMDSTVITVSNSSDKSVLQQPSVNTS
IGQPLPSTQLYLRQTETLTSNLRMPLTLTSNTQVIGTAGNTYLPALFTTQPAGSGPKP
FLFSLPQPLAGQQTQFVTVSQPGLSTFTAQLPAPQPLASSAGHSTASGQGEKKPYECT
LCNKTFTAKQNYVKHMFVHTGEKPHQCSICWRSFSLKDYLIKHMVTHTGVRAYQCSIC
NKRFTQKSSLNVHMRLHRGEKSYECYICKKKFSHKTLLERHVALHSASNGTPPAGTPP
GARAGPPGVVACTEGTTYVCSVCPAKFDQIEQFNDHMRMHVSDG"
BASE COUNT 600 a 784 c 630 g 468 t
ORIGIN
1 agattactca gccgggtgga tccagcgcca agccgggcct tccctgcctg aactttgaag
61 ctgttttgtc tccagaccca gccctcatcc actcaacaca ttcactgaca aactctcacg
121 ctcacaccgg gtcatctgat tgtgacatca gttgcaaggg gatgaccgag cgcattcaca
181 gcatcaacct tcacaacttc agcaattccg tgctcgagac cctcaacgag cagcgcaacc
241 gtggccactt ctgtgacgta acggtgcgca tccacgggag catgctgcgc gcacaccgct
301 gcgtgctggc agccggcagc cccttcttcc aggacaaact gctgcttggc tacagcgaca
361 tcgagatccc gtcggtggtg tcagtgcagt cagtgcaaaa gctcattgac ttcatgtaca
421 gcggcgtgct acgggtctcg cagtcggaag ctctgcagat cctcacggcc gccagcatcc
481 tgcagatcaa aacagtcatc gacgagtgca cgcgcatcgt gtcacagaac gtgggcgatg
541 tgttcccggg gatccaggac tcgggccagg acacgccgcg gggcactccc gagtcaggca
601 cgtcaggcca gagcagcgac acggagtcgg gctacctgca gagccaccca cagcacagcg
661 tggacaggat ctactcggca ctctacgcgt gctccatgca gaatggcagc ggcgagcgct
721 ctttttacag cggcgcagtg gtcagccacc acgagactgc gctcggcctg ccccgcgacc
781 accacatgga agaccccagc tggatcacac gcatccatga gcgctcgcag cagatggagc
841 gctacctgtc caccaccccc gagaccacgc actgccgcaa gcagccccgg cctgtgcgca
901 tccagaccct agtgggcaac atccacatca agcaggagat ggaggacgat tacgactact
961 acgggcagca aagggtgcag atcctggaac gcaacgaatc cgaggagtgc acggaagaca
1021 cagaccaggc cgagggcatc gagagtgagc ccaaaggtga aagcttcgac tcgggcgtca
1081 gctcctccat aggcaccgag cctgactcgg tggagcagca gtttgggcct ggggcggcgc
1141 gggacagcca ggctgaaccc acccaacccg agcaggctgc agaagccccc gctgagggtg
1201 gtccgcagac aaaccagcta gaaacaggtg cttcctctcc ggagagaagc aatgaagtgg
1261 agatggacag cactgttatc actgtcagca acagctccga caagagcgtc ctacaacagc
1321 cttcggtcaa cacgtccatc gggcagccat tgccaagtac ccagctctac ttacgccaga
1381 cagaaaccct caccagcaac ctgaggatgc ctctgacctt gaccagcaac acgcaggtca
1441 ttggcacagc tggcaacacc tacctgccag ccctcttcac tacccagccc gcgggcagtg
1501 gccccaagcc tttcctcttc agcctgccac agcccctggc aggccagcag acccagtttg
1561 tgacagtgtc ccagcccggt ctgtcgacct ttactgcaca gctgccagcg ccacagcccc
1621 tggcctcatc cgcaggccac agcacagcca gtgggcaagg cgaaaaaaag ccttatgagt
1681 gcactctctg caacaagact ttcaccgcca aacagaacta cgtcaagcac atgttcgtac
1741 acacaggtga gaagccccac caatgcagca tctgttggcg ctccttctcc ttaaaggatt
1801 accttatcaa gcacatggtg acacacacag gagtgagggc ataccagtgt agtatctgca
1861 acaagcgctt cacccagaag agctccctca acgtgcacat gcgcctccac cggggagaga
1921 agtcctacga gtgctacatc tgcaaaaaga agttctctca caagaccctc ctggagcgac
1981 acgtggccct gcacagtgcc agcaatggga ccccccctgc aggcacaccc ccaggtgccc
2041 gcgctggccc cccaggcgtg gtggcctgca cggaggggac cacttacgtc tgctccgtct
2101 gcccagcaaa gtttgaccaa atcgagcagt tcaacgacca catgaggatg catgtgtctg
2161 acggataagt agtatctttc tctctttctt atgaacaaaa caaaacaaca acaaaaaaca
2221 aacaaacaaa aaagctatgg cactagaatt taagaaatgt tttggtttca tttttacttt
2281 ctgtttttgt ttttgtttcg tttcattttg tactacatga agaactgttt tttgcctgct
2341 ggtacattac atttccggag gcttgggtga ataatagttt tcccagtctc cctcggatgg
2401 tggccttaag gcctggtagt gcttcaagag gtccactggt tggatctcta gctactggcc
2461 tctaaataca acccttcttt ac
//