LOCUS AK290104 1049 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ78337 complete cds, highly similar to Homo
sapiens secreted phosphoprotein 1 (osteopontin, bone sialoprotein
I, early T-lymphocyte activation 1), transcript variant 1, mRNA.
ACCESSION AK290104
VERSION AK290104.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1049)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1049
/clone="BRSTN2016363"
/clone_lib="BRSTN2"
/db_xref="H-InvDB:HIT000422901"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="subthalamic nucleus"
CDS 103..1047
/codon_start=1
/note="highly similar to Homo sapiens secreted
phosphoprotein 1 (osteopontin, bone sialoprotein I, early
T-lymphocyte activation 1), transcript variant 1, mRNA"
/protein_id="BAF82793.1"
/transl_table=1
/translation="MRIAVICFCLLGITCAIPVKQADSGSSEEKQLYNKYPDAVATWL
NPDPSQKQNLLAPQNAVSSEETNDFKQETLPSKSNESHDHMDDMDDEDDDDHVDSQDS
IDSNDSDDVDDTDDSHQSDESHHSDESDELVTDFPTDLPATEVFTPVVPTVDTYDGRG
DSVVYGLRSKSKKFRRPDIQYPDATDEDITSHMESEELNGAYKAIPVAQDLNAPSDWD
SRGKDSYETSQLDDQSAETHSHKQSRLYKRKANDESNEHSDVIDSQELSKVSREFHSH
EFHSHEDMLVVDPKSKEEDKHLKFRISHELDSASSEVN"
BASE COUNT 319 a 254 c 245 g 231 t
ORIGIN
1 actgggcagg aggaggcaga gcacagcatc gtcgggacca gactcgtctc aggccagttg
61 cagccttctc agccaaacgc cgaccaagga aaactcacta ccatgagaat tgcagtgatt
121 tgcttttgcc tcctaggcat cacctgtgcc ataccagtta aacaggctga ttctggaagt
181 tctgaggaaa agcagcttta caacaaatac ccagatgctg tggccacatg gctaaaccct
241 gacccatctc agaagcagaa tctcctagcc ccacagaatg ctgtgtcctc tgaagaaacc
301 aatgacttta aacaagagac ccttccaagt aagtccaacg aaagccatga ccacatggat
361 gatatggatg atgaagatga tgatgaccat gtggacagcc aggactccat tgactcgaac
421 gactctgatg atgtagatga cactgatgat tctcaccagt ctgatgagtc tcaccattct
481 gatgaatctg atgaactggt cactgatttt cccacggacc tgccagcaac cgaagttttc
541 actccagttg tccccacagt agacacatat gatggccgag gtgatagtgt ggtttatgga
601 ctgaggtcaa aatctaagaa gtttcgcaga cctgacatcc agtaccctga tgctacagac
661 gaggacatca cctcacacat ggaaagcgag gagttgaatg gtgcatacaa ggccatcccc
721 gttgcccagg acctgaacgc gccttctgat tgggacagcc gtgggaagga cagttatgaa
781 acgagtcagc tggatgacca gagtgctgaa acccacagcc acaagcagtc cagattatat
841 aagcggaaag ccaatgatga gagcaatgag cattccgatg tgattgatag tcaggaactt
901 tccaaagtca gccgtgaatt ccacagccat gaatttcaca gccatgaaga tatgctggtt
961 gtagacccca aaagtaagga agaagataaa cacctgaaat ttcgtatttc tcatgaatta
1021 gatagtgcat cttctgaggt caattaaaa
//