LOCUS AK290096 1524 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75011 complete cds, highly similar to Homo
sapiens uroplakin 3b (UPK3B), mRNA.
ACCESSION AK290096
VERSION AK290096.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1524)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1524
/clone="BRSTN2011033"
/clone_lib="BRSTN2"
/db_xref="H-InvDB:HIT000422893"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="subthalamic nucleus"
CDS 134..1096
/codon_start=1
/note="highly similar to Homo sapiens uroplakin 3b
(UPK3B), mRNA"
/protein_id="BAF82785.1"
/transl_table=1
/translation="MGLPWGQPHLGLQMLLLALNCLRPSLSLGEWGSWMDASSQTQGA
GGPAGVIGPWAPAPLRLGEAAPGTPTPVSVAHLLSPVATELVPYTPQITAWDLEGKVT
ATTFSLEQPRCVFDGLASASDTVWLVVAFSNASRGFQNPETLADIPASPQLLTDGHYM
TLPLSPDQLPCGDPMAGSGGAPVLRVGHDHGCHQQPFCNAPLPGPGPYREDPRIHRHL
ARAAKWQHDRHYLHPLFSGRPPTLGLLGSLYHALLQPVVAGGGPGAAADRLLHGQALH
DPPHPTQRGRHTAGGLQAWPGPPPQPQPLAWPLCMGLGEMGRRE"
BASE COUNT 235 a 546 c 429 g 314 t
ORIGIN
1 atttttttgc aggtctttcc agcccctggg gcagcctgat taaccagctt ctccagggcc
61 aagctgttgg gggtgaggtg cagcccgaag cagccagacc agcccctgag cctcccgggt
121 gctggcagct gtcatggggc taccctgggg gcagcctcac ctagggctgc agatgctcct
181 cctggcgttg aactgtctcc ggcccagcct gagcctgggt gagtgggggt cctggatgga
241 cgcgtccagc cagacccaag gggctggggg ccctgctgga gtgattggac cctgggcgcc
301 cgcccccctc cgattgggag aggcagcccc agggaccccc acgcccgtct ccgtggctca
361 ccttttgtcc cccgtggcca cagagctggt gccctacaca ccacagataa cagcttggga
421 cctggaaggg aaggtcacag ccaccacctt ctccctggag cagccgcgct gtgtcttcga
481 tgggcttgcc agcgccagcg ataccgtctg gctcgtggtg gccttcagca atgcctccag
541 gggcttccag aacccggaga cactggctga cattccggcc tccccacagc tgctgaccga
601 tggccactac atgacgctgc ccctgtctcc ggaccagctg ccctgtggcg accccatggc
661 gggcagcgga ggcgcccccg tgctgcgggt gggccatgac cacggctgcc accagcagcc
721 cttctgcaac gcgcccctcc ctggccctgg accctatcgg gaagaccccc ggatccatcg
781 acacctggcc agggcggcga agtggcagca tgatcgtcat tacctccatc ctctcttctc
841 tggccggcct cctactcttg gccttcttgg cagcctctac catgcgcttc tccagcctgt
901 ggtggccgga ggaggccccg gagcagctgc ggatcggctc cttcatgggc aagcgctaca
961 tgacccacca catcccaccc agcgaggccg ccacactgcc ggtgggctgc aagcctggcc
1021 tggaccccct ccccagcctc agcccctagc ctggcctctt tgcatggggc tgggggagat
1081 ggggcgccgg gagtgagtgc atggtgcttt gtcccagctc ctgcacccac aggccccctc
1141 agggctcctt gcctttcccc cccaccagca caccccgtac cctgcctgga atcccagcac
1201 cagcccccct gcctctcctc tgcctttctg gtttctctcc ctctccaagc atctgtaagt
1261 tgcactcagg agggtttagg ggagggccat gggcaggctg gtctcgtgat agtgagtgag
1321 tgctcatggg atctggttgt ttagaagcat acagcacctc ctgcttcact ctctctgtct
1381 ctcctgctcc accatggcca gaaacgtgcc tgcttcccct tcgccttctg ccgtgattgt
1441 cagtttcttg agggctcccc agccatgctt cctgtacagc ctgcaaaact gtgagtcaat
1501 taaacctctt ttcttcataa attc
//