LOCUS AK290022 1885 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77449 complete cds, highly similar to Human
prostaglandin endoperoxide synthase mRNA.
ACCESSION AK290022
VERSION AK290022.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1885)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1885
/clone="BRHIP3031048"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000422819"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 34..1833
/codon_start=1
/note="highly similar to Human prostaglandin endoperoxide
synthase mRNA"
/protein_id="BAF82711.1"
/transl_table=1
/translation="MSRSLLLRFLLFLLLLPPLPVLLADPGAPTPVNPCCYYPCQHQG
ICVRFGLDRYQCDCTRTGYSGPNCTIPGLWTWLRNSLRPSPSFTHFLLTHGRWFWEFV
NATFIREMLMRLVLTVRSNLIPSPPTYNSAHDYISWESFSNVSYYTRILPSVPKDCPT
PMGTKGKKQLPDAQLLARRFLLRRKFIPDPQGTNLMFAFFAQHFTHQFFKTSGKMGPG
FTKALGHGVDLGHIYGDNLERQYQLRLFKDGKLKYQVLDGEMYPPSVEEAPVLMHYPR
GIPPQSQMAVGQEVFGLLPGLMLYATLWLREHNRVCDLLKAEHPTWGDEQLFQTTRLI
LIGETIKIVIEEYVQQLSGYFLQLKFDPELLFGVQFQYRNRIAMEFNHLYHWHPLMPD
SFKVGSQEYSYEQFLFNTSMLVDYGVEALVDAFSRQIAGRIGGGRNMDHHILHVAVDV
IRESREMRLQPFNEYRKRFGMKPYTSFQELVGEKEMAAELEELYGDIDALEFYPGLLL
EKCHPNSIFGESMIEIGAPFSLKGLLGNPICSPEYWKPSTFGGEVGFNIVKTATLKKL
VCLNTKTCPYVSFRVPDASQDDGPAVERPSTEL"
BASE COUNT 376 a 575 c 506 g 428 t
ORIGIN
1 gcactctgcg tcccgcaccc cagcagccgc gccatgagcc ggagtctctt gctccggttc
61 ttgctgttcc tgctcctgct cccgccgctc cccgtcctgc tcgcggaccc aggggcgccc
121 acgccagtga atccctgttg ttactatcca tgccagcacc agggcatctg tgtccgcttc
181 ggccttgacc gctaccagtg tgactgcacc cgcacgggct attccggccc caactgcacc
241 atccctggcc tgtggacctg gctccggaat tcactgcggc ccagcccctc tttcacccac
301 ttcctgctca ctcacgggcg ctggttctgg gagtttgtca atgccacctt catccgagag
361 atgctcatgc gcctggtact cacagtgcgc tccaacctta tccccagtcc ccccacctac
421 aactcagcac atgactacat cagctgggag tctttctcca acgtgagcta ttacactcgt
481 attctgccct ctgtgcctaa agattgcccc acacccatgg gaaccaaagg gaagaagcag
541 ttgccagatg cccagctcct ggcccgccgc ttcctgctca ggaggaagtt catacctgac
601 ccccaaggca ccaacctcat gtttgccttc tttgcacaac acttcaccca ccagttcttc
661 aaaacttctg gcaagatggg tcctggcttc accaaggcct tgggccatgg ggtagacctc
721 ggccacattt atggagacaa tctggagcgt cagtatcaac tgcggctctt taaggatggg
781 aaactcaagt accaggtgct ggatggagaa atgtacccgc cctcggtaga agaggcgcct
841 gtgttgatgc actacccccg aggcatcccg ccccagagcc agatggctgt gggccaggag
901 gtgtttgggc tgcttcctgg gctcatgctg tatgccacgc tctggctacg tgagcacaac
961 cgtgtgtgtg acctgctgaa ggctgagcac cccacctggg gcgatgagca gcttttccag
1021 acgacccgcc tcatcctcat aggggagacc atcaagattg tcatcgagga gtacgtgcag
1081 cagctgagtg gctatttcct gcagctgaaa tttgacccag agctgctgtt cggtgtccag
1141 ttccaatacc gcaaccgcat tgccatggag ttcaaccatc tctaccactg gcaccccctc
1201 atgcctgact ccttcaaggt gggctcccag gagtacagct acgagcagtt cttgttcaac
1261 acctccatgt tggtggacta tggggttgag gccctggtgg atgccttctc tcgccagatt
1321 gctggccgga tcggtggggg caggaacatg gaccaccaca tcctgcatgt ggctgtggat
1381 gtcatcaggg agtctcggga gatgcggctg cagcccttca atgagtaccg caagaggttt
1441 ggcatgaaac cctacacctc cttccaggag ctcgtaggag agaaggagat ggcagcagag
1501 ttggaggaat tgtatggaga cattgatgcg ttggagttct accctggact gcttcttgaa
1561 aagtgccatc caaactctat ctttggggag agtatgatag agattggggc tcccttttcc
1621 ctcaagggtc tcctagggaa tcccatctgt tctccggagt actggaagcc gagcacattt
1681 ggcggcgagg tgggctttaa cattgtcaag acggccacac tgaagaagct ggtctgcctc
1741 aacaccaaga cctgtcccta cgtttccttc cgtgtgccgg atgccagtca ggatgatggg
1801 cctgctgtgg agcgaccatc cacagagctc tgaggggcag gaaagcagca ttctggaggg
1861 gagagctttg tgcttgtcat tccag
//