LOCUS AK290020 4699 bp mRNA linear HUM 09-JAN-2008 DEFINITION Homo sapiens cDNA FLJ78466 complete cds, highly similar to Homo sapiens nuclear protein, ataxia-telangiectasia locus (NPAT), mRNA. ACCESSION AK290020 VERSION AK290020.1 KEYWORDS FLI_CDNA; oligo capping. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4699) AUTHORS Isogai,T. and Yamamoto,J. TITLE Direct Submission JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases. Contact:Takao Isogai Reverse Proteomics Research Institute; 1-9-11 Kaji-cho, Chiyoda-ku, Tokyo 101-0044, Japan E-mail :flj-cdna@nifty.com REFERENCE 2 AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K., Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y., Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M., Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T. TITLE NEDO human cDNA sequencing project JOURNAL Unpublished (2007) COMMENT Human cDNA sequencing project focused on splicing variants of mRNA in NEDO functional analysis of protein and research application project supported by Ministry of Economy, Trade and Industry, Japan; cDNA selection for complete cds sequencing: Reverse Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan (Hitachi) and Japan Biological Informatics Consortium, Japan (JBIC); cDNA complete cds sequencing: JBIC; cDNA library construction: Helix Research Institute supported by Japan Key Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing: Research Association for Biotechnology, Japan, Biotechnology Center, National Institute of Technology and Evaluation, Japan and HRI; cDNA mapping to human genome: Central Research Laboratory, Hitachi; evaluation and annotation: REPRORI. FEATURES Location/Qualifiers source 1..4699 /clone="BRHIP3030450" /clone_lib="BRHIP3" /db_xref="H-InvDB:HIT000422817" /db_xref="taxon:9606" /mol_type="mRNA" /note="cloning vector: pME18SFL3" /organism="Homo sapiens" /tissue_type="hippocampus" CDS 103..4386 /codon_start=1 /note="highly similar to Homo sapiens nuclear protein, ataxia-telangiectasia locus (NPAT), mRNA" /protein_id="BAF82709.1" /transl_table=1 /translation="MLLPSDVARLVLGYLQQENLISTCQTFILESSDLKEYAEHCTDE GFIPACLLSLFGKNLTTILNEYVAMKTKETSNNVPAIMSSLWKKLDHTLSQIRSMQSS PRFAGSQRARTRTGIAEIKRQRKLASQTAPASAELLTLPYLSGQFTTPPSTGTQVTRP SGQISDPSRSYFVVVNHSQSQDTVTTGEALNVIPGAQEKKAHASLMSPGRRKSESQRK STTLSGPHSTIRNFQDPNAFAVEKQMVIENAREKILSNKSLQEKLAENINKFLTSDNN IAQVPKQTDNNPTEPETSIDEFLGLPSEIHMSEEAIQDILEQTESDPAFQALFDLFDY GKTKNNKNISQSISSQPMESNPSIVLADETNLAVKGSFETEESDGQSGQPAFCTSYQN DDPLNALKNSNNHDVLRQEDQENFSQISTSIQKKAFKTAVPTEQKCDIDITFESVPNL NDFNQRGNSNAECNPHCAELYTNQMSTETEMAIGIEKNSLSSNVPSESQLQPDQPDIP ITSFVSLGCEANNENLILSGKSSQLLSQDTSFTGKPSKKSQFCENSNDTVKLKINFHG SKSSDSSEVHKSKIEINVLEPVMSQLSNCQDNSCLQSEILPVSVESSHLNVSGQVEIH LGDSLSSTKQPSNDSASVELNHTENEAQASKSENSQEPSSSVKEENTIFLSLGGNANC EKVALTPPEGTPVENSHSLPPESVCSSVGDSHPESQNTDDKPSSNNSAEIDASNIVSL KVIISDDPFVSSDTELTSAVSSINGENLPTIILSSPTKSPTKNAGLVKCLSSEETVGA VVYAEVGDSASMEQSLLTFKSEDSAVNNTQNEDGIAFSANVTPCVSKDGGYIQLMPAT STAFGNSNNILIATCVTDPTALGTSVSQSNVVVLPGNSAPMTAQPLPPQLQTPPRSNS VFAVNQAVSPNFSQGSAIIIASPVQPVLQGMVGMIPVSVVGQNGNNFSTPPRQVLHMP LTAPVCNRSIPQFPVPPKSQKAQGLRNKPCIGKQVNNLVDSSGHSVGCHAQKTEVSDK SIATDLGKKSEETTVPFPEESIVPAAKPCHRRVLCFDSTTAPVANTQGPNHKMVSQNK ERNAVSFPNLDSPNVSSTLKPPSNNAIKREKEKPPLPKILSKSESAISRHTTIRETRS EKKVSPTEIVLESFHKATANKENELCSDVERQKNPENSKLSIGQQNGGLRSEKSIASL QEMTKKQGTSSNNKNVLSVGTAVKDLKQEQTKSASSLITTEMLQDIQRHSSVSRLADS SDLPVPRTPGSGAGEKHKEEPIDIIKAPSSRRFSEDSSTSKVMVPPVTPDLPACSPAS ETGSENSVNMAAHTLMILSRAAISRTTSATPLKDNTQQFRASSRSTTKKRKIEELDER ERNSRPSSKNLTNSSIPMKKKKIKKKKLPSSFPAGMDVDKFLLSLHYDE" BASE COUNT 1579 a 978 c 879 g 1263 t ORIGIN 1 agtgccgcca ctggaaccag gagatgcggc gcaggagctg tcgctgtgtt tgctttaacc 61 tgagtcttgt tccttattgt ggttcctgct gtggttttga tcatgttgtt accctcggac 121 gtagcccggc ttgtattggg ttacttacag caagaaaacc tcatttctac ctgccagact 181 tttattttgg aaagttcaga tttaaaagaa tatgcagaac attgtacaga tgaagggttt 241 attccagcct gcttactgtc cttatttgga aaaaacttga caacaatttt aaatgagtat 301 gtagctatga aaacaaaaga aacatcaaat aatgtcccag caataatgtc atctctatgg 361 aagaaattgg accatacact ttctcagatc aggagcatgc aaagttcccc aaggtttgct 421 ggcagtcaga gagcccgaac gagaactgga attgcagaaa tcaaacggca gagaaagctt 481 gcatctcaaa cagctccagc cagtgcagag ttgctcactt taccttacct ttcaggacag 541 tttaccactc ctccttccac aggtacacag gttactcgac caagtggcca aatttcagat 601 ccatcgaggt catattttgt agtggtcaac cactcacagt cacaagatac tgtaaccact 661 ggagaagctt taaatgtcat tcctggtgct caggaaaaga aagcacatgc cagtttaatg 721 tctcccggta gacgcaaaag tgaatctcag agaaaaagta ccactttgtc tggccctcat 781 tcaacaatac ggaatttcca agatccaaac gcttttgcag tagaaaaaca aatggttatt 841 gaaaatgcac gagaaaaaat actaagcaac aaatctcttc aagaaaagct agcagaaaac 901 ataaataaat ttttaactag tgataacaat attgcccaag tacctaagca aacagataac 961 aaccctacgg agccagagac ttcaattgat gaattcctag gacttccgag tgaaattcac 1021 atgtctgaag aagctataca ggacatattg gaacagacag aatcagaccc agcatttcag 1081 gcactctttg atctctttga ctatggcaaa acaaagaata ataaaaatat atcacaaagt 1141 atttccagtc aacctatgga atccaatccc agtatagtct tagcagatga aactaatcta 1201 gcagttaaag gttcttttga aacagaagaa tctgatggtc agtctggtca gcccgctttt 1261 tgtacatcct atcagaatga tgacccatta aatgctttga agaatagcaa caaccatgat 1321 gtgcttagac aagaagacca ggaaaatttt tcccaaataa gtaccagcat acagaaaaag 1381 gcctttaaaa cagctgtacc cactgaacag aagtgtgaca ttgacattac ctttgagtcc 1441 gtgcctaatt tgaatgactt taaccaaaga gggaattcta atgctgaatg taatccacat 1501 tgtgctgaat tatacaccaa tcagatgtcc actgaaactg aaatggctat agggattgaa 1561 aagaactctt tgtcttcaaa tgtaccgagt gaatctcagt tacagcctga tcagcctgat 1621 ataccaataa cttcatttgt ttcacttggt tgtgaagcta acaatgaaaa cttaattctc 1681 tctgggaaga gttctcaact tttatcccaa gatacttcat ttactggaaa gccatctaaa 1741 aaaagtcaat tttgtgaaaa ttctaatgat acagtaaaac ttaaaattaa ttttcatggt 1801 tccaagtcat cagattctag tgaagttcac aagagtaaaa tagaaattaa tgtgttagaa 1861 ccagttatgt cacagctatc aaattgccaa gataattctt gtcttcaaag tgaaatacta 1921 cctgtgtctg ttgaaagttc acatttaaat gtatctggac aagtagaaat tcatcttgga 1981 gattcgctgt cttctactaa acaaccatct aatgattcag catctgttga gttaaatcat 2041 acagaaaatg aagctcaggc atccaagtct gagaattcac aggagccttc atcttctgta 2101 aaagaagaga atactatttt tctctcttta ggtggaaatg ctaactgtga gaaagttgca 2161 ctgacgcctc cagaaggcac tcctgtagaa aacagtcact ctcttcctcc agaatctgtg 2221 tgttcttcag tgggagattc tcaccctgag tcccaaaata ctgatgataa accttctagc 2281 aacaactcag cagagataga tgcatcaaat atcgtctctc tcaaagttat cattagtgat 2341 gatccatttg tttcctcaga tactgaactt accagtgctg tttctagtat taatggagaa 2401 aacctgccaa ctataatctt gtcttctcct actaaatcac ctactaaaaa tgcaggacta 2461 gttaaatgcc tatcttcaga agaaactgta ggtgctgttg tatatgccga agtaggggat 2521 tcagcctcaa tggaacagag tcttttaaca ttcaaatctg aagactctgc agtaaacaat 2581 actcagaatg aagatggcat tgctttttcg gctaatgtta caccatgtgt ttccaaggat 2641 ggaggatata tacagttgat gccagccaca agcacagctt ttggcaattc aaataacatt 2701 ctgatagcta cctgtgtgac tgatccaaca gcgttaggaa catctgtaag tcagtctaat 2761 gtagtggtgt tgcctggaaa ttctgcacct atgactgctc aacctctacc acctcagtta 2821 cagacaccac caaggtcaaa cagtgtattt gctgtcaacc aagctgtgtc accaaacttt 2881 tcacaaggat ctgccataat aattgcctct ccagtccagc ctgtactcca aggaatggta 2941 gggatgatcc cagtatctgt ggttggacag aatggaaata acttttctac tcctcctcgg 3001 caggttcttc atatgccttt gacagcacct gtatgcaata gaagtatccc tcaattcccc 3061 gtccctccaa aatctcagaa ggctcaggga ctaagaaaca agccttgtat aggaaaacaa 3121 gtaaataatt tggtggattc gtcaggtcat tcagttggat gtcatgcaca aaaaactgaa 3181 gtttctgaca aaagtattgc cacagatctt gggaaaaaat cagaagaaac cacagttccc 3241 ttcccagaag agagtatagt tccagctgct aaaccatgcc acagacgtgt actctgtttc 3301 gacagcacta ctgctcctgt ggcaaatacg caggggccaa accataagat ggtgtcccaa 3361 aacaaagaaa ggaatgcagt ctcttttcct aatcttgact cacccaatgt gtcctccacc 3421 ttaaaacccc cttctaataa tgctatcaaa agagagaaag agaagcctcc tctgcctaag 3481 attttatcta aatcggaaag tgccattagc cggcatacca ccataagaga aactcgatca 3541 gaaaagaaag tttcaccaac agaaattgtg cttgaatctt tccataaagc aacagctaat 3601 aaggagaatg aattatgcag cgatgtagaa agacagaaaa atccagaaaa ttcaaaacta 3661 tctattgggc agcaaaatgg gggtttgcga agtgagaaat ctatagcttc actgcaagaa 3721 atgaccaaaa aacaaggcac atcttcaaac aataaaaatg tactttcagt aggtacagct 3781 gtgaaggatc taaagcaaga acaaactaaa tccgccagtt ctttgattac cacagaaatg 3841 ttacaggata tacagaggca cagctcagta agtaggcttg ctgatagtag tgatttacct 3901 gtgccccgga cacctggctc aggggcaggg gaaaaacata aagaagaacc tatagatatt 3961 atcaaggccc cctctagtag gcgtttcagt gaagacagta gtacatcaaa agtaatggtc 4021 cctcctgtca ccccagactt gcctgcctgc agccctgcca gtgaaacagg aagtgaaaac 4081 agtgtaaata tggctgccca cacattaatg attctctcca gggcagccat ttctaggact 4141 acttcagcaa ctcctctgaa agataacaca caacagttta gagcatcttc aaggagcacc 4201 acaaaaaagc ggaaaattga ggaattagat gaacgtgagc gaaactctcg tccttctagt 4261 aaaaatctta caaattcatc aataccaatg aaaaagaaga aaattaagaa aaagaagctt 4321 cccagttcat ttccagcagg aatggatgta gacaaatttt tgttatcatt gcattatgat 4381 gagtaaacat tctggacaca taagaacagt aggtgttaaa aactcatatc ccttaaactg 4441 agtgtaggga atgggatatt gacagaatct gaaagcatga cctgcacttt cattgtactg 4501 aaacttcact ttatatctaa attatgctgt ttctgaaaca gcttcctagt ttgtaaatag 4561 acttacttgg tatattttta ttttgggaaa aacgtttgca gaaatgtaag taaagccaat 4621 ctgcaaaact gtatagcttt gacaattcca tattgtaaat actgtgtaaa tcttgttgaa 4681 atagaggtta aatcaacct //