LOCUS AK290015 3673 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ77529 complete cds, highly similar to Homo
sapiens R3H domain containing 1 (R3HDM1), mRNA.
ACCESSION AK290015
VERSION AK290015.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3673)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3673
/clone="BRHIP3027701"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000422812"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 320..3622
/codon_start=1
/note="highly similar to Homo sapiens R3H domain
containing 1 (R3HDM1), mRNA"
/protein_id="BAF82704.1"
/transl_table=1
/translation="MRMSDTVTVKDETATMKDLEAEVKDTTRVENLIKSENYGKILVE
KNEHCIENNIDLQRPLQSFGQTGKRSKSSSKLKLVRSLAVCEESPPPPAPEISQENQE
KIQIQLTQSFEKEEKPSKDEAEEEKASDKLPRKMLSRDSSQEYTDSTGIDLHEFLVNT
LKNNPRDRMMLLKLEQEILDFIGNNESPRKKFPPMTSYHRMLLHRVAAYFGLDHNVDQ
SGKSVIVNKTSNTRIPDQKFNEHIKDDKGEDFQKRYILKRDNSSFDKDDNQMRIRLKD
DRRSKSIEEREEEYQRARDRIFSQDSLCSQENYIIDKRLQDEDASSTQQRRQIFRVNK
DASGRSTNSHQSSTENELKYSEPRPWSSTDSDSSLRNLKPAVTKASSFSGISVLTRGD
SSGSSKSIGRLSKTGSESSGSVGSSTGSLSHIQQPLPGTALSQSSHGAPVVYPTVSTH
SSLSFDGGLNGQVASPSTSFFLLPLEAAGIPPGSILINPQTGQPFINPDGSPVVYNPP
MTQQPVRSQVPGPPQPPLPAPPQQPAANHIFSQQDNLGSQFSHMSLARQPSADGSDPH
AAMFQSTVVLQSPQQSGYIMTAAPPPHPPPPPPPPPPPPPLPPGQPVPTAGYPASGHP
VSQPVLQQQGYIQQPSPQMPACYCAPGHYHSSQPQYRPVPSVHYNSHLNQPLPQPAQQ
TGYQVIPNQQQNYQGIVGVQQPQSQSLVSGQPNSIGNQIQGVVIPYTSVPTYQVSLPQ
GSQGIPHQTYQQPVMFPNQSNQGSMPTTGMPVYYSVIPPGQQNNLSSSVGYLQHPGSE
QVQFPRTTSPCSSQQLQGHQCTAGPPPPPGGGMVMMQLSVPNNPQSCAHSPPQWKQNK
YYCDHQRGQKCVEFSSVDNIVQHSPQLSSPIISPAQSPAPAQLSTLRTVRPSGPPLSI
MPQFSRPFVPGQGDSRYPLLGQPLQYNPPAVLHGHIPNQQGQPGSRHGNRGRRQAKKA
ASTDLGAGETVVGKVLEITELPDGITRMEAEKLFGELFKIGAKIRWLRDPQSQPRRHP
LCCGSGDNTANPERSKPSDLASTYTVLATFPSISAAQNALKKQINLVNKFKLRTSKKH
YDFHILERASSQ"
BASE COUNT 1125 a 962 c 736 g 850 t
ORIGIN
1 agtttacagg tactatggaa agaacatctc cttaactctg tatgatgaag caaataccaa
61 tacaatgaag gccacggaaa ggtatgatat atttgatcca agacagtcca ttccagtccg
121 ggaatctaca gtggtgacaa ggacatggga ctcctcctgc cagattacag atggttcact
181 acagttgaca tcctggctga caactgtgaa aaagaacctt ggattatttt attttatttt
241 tgtgggacac cacaatccca aatccaaagg acgcatcagg cttcaagctc cctgtagaat
301 tcgaaaataa ccttttctaa tgaggatgtc tgatactgtt actgtaaaag atgaaactgc
361 aacaatgaag gatttggagg cagaagtgaa agatacaacc agagttgaaa atcttatcaa
421 atcagaaaac tatgggaaga ttttggtaga gaagaatgaa cattgtattg agaacaatat
481 agatttgcag cggccattgc agtcatttgg acagacagga aaaaggtcta agtcaagctc
541 aaagttaaag ctagttcgga gccttgcagt gtgtgaagaa tctccaccac cccctgcacc
601 agagatatca caggagaacc aggagaaaat tcagatccag ttaacacaat catttgagaa
661 agaagagaag ccctcaaaag atgaagcaga agaagaaaag gccagtgata agttgcccag
721 aaaaatgtta tcaagagatt ccagtcaaga atacactgat tcaactggca tagatctaca
781 tgaattttta gtaaatacat taaaaaacaa tcccagggac agaatgatgc tgctgaaatt
841 ggaacaagaa attttagatt tcattggtaa taatgagtct ccacgtaaaa aattcccccc
901 aatgacatct taccatagga tgctattaca cagagtagcc gcttactttg gattagacca
961 caatgttgat cagagtggga agtctgtcat agtaaacaaa actagcaata caagaatacc
1021 tgatcagaaa tttaatgaac atattaagga tgataaaggt gaagactttc agaaacgtta
1081 tatcctcaag agagataact ctagctttga caaagatgat aaccagatga gaatacgttt
1141 gaaagatgac agaagaagca aatctataga agaaagagaa gaagagtacc agagagccag
1201 agaccgaata ttttcccaag attccctgtg ttcccaagag aattacatta ttgacaaaag
1261 actccaagac gaggatgcca gtagtaccca gcagaggcgc cagatattta gagttaataa
1321 agatgcttca gggagatcta caaatagcca tcaaagcagc actgagaatg agttgaagta
1381 ctcggaacca cgaccctgga gcagcacaga ttcagacagc tctcttcgaa acctgaaacc
1441 tgctgtaacc aaagccagca gcttcagtgg aatctcagtc ctgacaagag gtgatagttc
1501 tggaagcagc aaaagcatag gcaggctttc aaaaacaggt tctgagtctt ctggtagtgt
1561 agggtcatct acaggctctc tttctcacat ccagcagcct cttccaggta cagctctcag
1621 ccagtcttct catggcgcac ctgtcgtcta tccaactgtc agcactcata gttctctttc
1681 ctttgatggt ggcctaaatg ggcaagtcgc atctcctagc actagcttct ttttgcttcc
1741 cttggaagcg gcaggcatac cacctggcag tattctgatc aacccacaaa caggtcagcc
1801 cttcataaac ccagatggga gtccagttgt gtataatcct cctatgactc aacaaccagt
1861 tagatcccaa gtgcctggac ctccacagcc acctctgcca gccccacctc aacaaccagc
1921 agctaatcac attttctcac agcaggataa cctagggtct cagtttagcc acatgagtct
1981 tgctcgccag ccatctgctg atggttctga ccctcatgcc gccatgttcc agtccactgt
2041 ggttcttcag tctccacagc agtctggtta tatcatgaca gcagcccctc caccacatcc
2101 tcctccaccg ccaccaccac cacctcctcc tcctccccta ccacctgggc agccagtccc
2161 tactgctgga tatcctgcct ctggtcatcc tgtcagccag cctgtgctcc agcagcaggg
2221 atatattcag cagccatcac cacagatgcc agcctgttat tgcgctccag gccactatca
2281 ctccagccaa cctcagtatc gcccagtccc ttctgttcat tacaattcac atctaaacca
2341 accactgcca caacctgcgc agcagacagg ttatcaagtt atacccaacc agcagcaaaa
2401 ctaccaagga atagttggag ttcagcaacc ccagagtcag agcctagtca gtggccaacc
2461 caacagcatt ggaaatcaga ttcaaggagt ggtcatcccc tatacttcag tgccaacata
2521 tcaggtttca ctgcctcaag gttctcaagg aattccccat cagacttatc aacagcctgt
2581 tatgttccct aatcagtcta atcaaggatc tatgcccaca acaggaatgc ctgtttacta
2641 tagtgtcatt ccacctggtc aacaaaacaa tttaagctct tcagtaggtt acctgcaaca
2701 tccaggatca gaacaagtac aatttccccg aaccacttca ccatgcagtt cccagcagct
2761 tcaaggccac caatgtacag ctggaccacc accgccacct ggtgggggga tggtgatgat
2821 gcagctcagt gtaccaaaca atccacaatc ttgtgcccac tcacccccgc agtggaaaca
2881 aaacaaatat tactgtgatc accagagagg acagaagtgt gtagaattta gcagtgtaga
2941 caatattgtc cagcacagcc ctcaactcag tagccccatt atttcaccag ctcagtcgcc
3001 agcaccagct cagctgtcca ccctgagaac tgtacgtccc tctggaccac cactttccat
3061 catgccccaa ttttctagac cttttgtccc cgggcaagga gattccaggt atccattact
3121 tggccagcca ctgcagtaca atcctcctgc tgttctgcac ggacacattc caaaccaaca
3181 gggtcagcct ggcagcaggc atggaaaccg aggaaggaga caagctaaaa aagctgcatc
3241 cacagacctt ggagcaggag aaacagttgt tgggaaggtc ttggaaatta ctgaactacc
3301 agatggaata actcgcatgg aagctgaaaa gctttttggg gaactcttta aaattggcgc
3361 caagatccgg tggctccggg acccccagtc ccaaccacgt cgtcaccccc tctgctgtgg
3421 cagtggggac aacactgcca accctgaacg ctctaaaccc agtgacttgg cctccaccta
3481 caccgtctta gccacattcc cctccatttc agctgcacag aatgcactga agaaacaaat
3541 taacttagtt aacaagttta agctgagaac aagcaagaag cactatgact ttcacatttt
3601 ggaaagggca agttctcagt aacagccacc tttggaccct tcgcctttat ggttcccctg
3661 ccctctccca tct
//