LOCUS AK289990 3611 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75599 complete cds, highly similar to Homo
sapiens hect domain and RLD 3 (HERC3), mRNA.
ACCESSION AK289990
VERSION AK289990.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3611)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..3611
/clone="BRHIP3015519"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000422787"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 183..3335
/codon_start=1
/note="highly similar to Homo sapiens hect domain and RLD
3 (HERC3), mRNA"
/protein_id="BAF82679.1"
/transl_table=1
/translation="MLCWGYWSLGQPGISTNLQGIVAEPQVCGFISDRSVKEVACGGN
HSVFLLEDGEVYTCGLNTKGQLGHEREGNKPEQIGALADQHIIHVACGESHSLALSDR
GQLFSWGAGSDGQLGLMTTEDSVAVPRLIQKLNQQTILQVSCGNWHCLALAADGQFFT
WGKNSHGQLGLGKEFPSQASPQRVRSLEGIPLAQVAAGGAHSFALSLSGAVFGWGMNN
AGQLGLSDEKDRESPCHVKLLRTQKVVYISCGEEHTAVLTKSGGVFTFGAGSCGQLGH
DSMNDEVNPRRVLELMGSEVTQIACGRQHTLAFVPSSGLIYAFGCGARGQLGTGHTCN
VKCPSPVKGYWAAHSGQLSARADRFKYHIVKQIFSGGDQTFVLCSKYENYSPAVDFRT
MNQAHYTSLINDETIAVWRQKLSEHNNANTINGVVQILSSAACWNGSFLEKKIDEHFK
TSPKIPGIDLNSTRVLFEKLMNSQHSMILEQILNSFESCLIPQLSSSPPDVEAMRIYL
ILPEFPLLQDSKYYITLTIPLAMAILRLDTNPSKVLDNWWSQVCPKYFMKLVNLYKGA
VLYLLRGRKTFLIPVLFNNYITAALKLLEKLYKVNLKVKHVEYDTFYIPEISNLVDIQ
EDYLMWFLHQAGMKARPSIIQDTVTLCSYPFIFDAQAKTKMLQTDAELQMQVAVNGAN
LQNVFMLLTLEPLLARSPFLVLHVRRNNLVGDALRELSIHSDIDLKKPLKVIFDGEEA
VDAGGVTKEFFLLLLKELLNPIYGMFTYYQDSNLLWFSDTCFVEHNWFHLIGITCGLA
IYNSTVVDLHFPLALYKKLLNVKPGLEDLKELSPTEGRSLQELLDYPGEDVEETFCLN
FTICRESYGVIEQKKLIPGGDNVTVCKDNRQEFVDAYVNYVFQISVHEWYTAFSSGFL
KVCGGKVLELFQPSELRAMMVGNSNYNWEELEETAIYKGDYSATHPTVKLFWETFHEF
PLEKKKKFLLFLTGSDRIPIYGMASLQIVIQSTASGEEYLPVAHTCYNLLDLPKYSSK
EILSARLTQALDNYEGFSLA"
BASE COUNT 963 a 772 c 889 g 987 t
ORIGIN
1 attattattg tgacgccgaa aacggagaaa ccccgggtcc ggcgagaggg gctgtgacag
61 tcggagtccc aagctgcggt tcggctgctg ccgagaactg caaggtgtgg aatatttctg
121 gcttctagtc caatgccaag tgtgtgacct gtggctacat gattccctga aagataagaa
181 caatgttatg ttggggatat tggtctctgg gccaacctgg tatcagcacc aacctgcagg
241 gaattgtggc tgagccccag gtgtgtgggt tcatatctga cagaagtgtc aaggaagtgg
301 cctgtggggg aaaccactct gtgttcctgc tggaagatgg ggaagtttac acatgtggtt
361 tgaacaccaa ggggcaactg ggccatgaga gggaaggaaa caagccagaa caaattggag
421 ctctggcaga tcagcatatc attcatgtgg catgtggcga gtcccacagt ctggccctca
481 gtgaccgagg ccagctgttt tcttggggtg cagggagtga tggtcagcta ggactcatga
541 ctactgagga ttctgtggca gtgcccaggt taatacaaaa gctgaaccag caaacaatat
601 tacaagtttc ctgtggcaac tggcattgct tggctcttgc ggctgatggc cagttcttca
661 cctggggaaa gaacagccat gggcagcttg gcttagggaa ggagttcccc tcccaagcca
721 gcccacagag ggtgaggtcc ctggagggga tcccactggc tcaggtggct gccggagggg
781 ctcacagctt tgccctgtcc ctctcaggag ctgtttttgg ctgggggatg aataatgccg
841 ggcagctagg gctcagtgat gaaaaagatc gagaatctcc atgccatgta aaactcttac
901 gcacgcaaaa agttgtctat attagttgtg gagaagaaca cacagcagtt ctcacaaaga
961 gtggaggtgt gtttaccttt ggcgctggtt cctgtgggca acttggacac gactccatga
1021 atgatgaggt taaccctaga agagttctag agctgatggg tagtgaagta actcaaattg
1081 cttgtggcag acaacatacc ctagccttcg tgccttcttc tggactcatc tatgcatttg
1141 gttgtggagc aagaggtcaa ttaggaactg ggcacacttg taatgttaag tgcccatctc
1201 ctgtcaaggg ttactgggct gcccacagtg gccagctttc agcccgagct gatcgcttta
1261 aatatcatat cgttaagcag atcttctctg gaggagacca gacttttgta ctttgctcca
1321 aatacgagaa ttattctcct gctgttgact tcaggactat gaaccaagca cattatacca
1381 gtttaataaa tgatgaaacc atagcagttt ggagacaaaa actctcagaa cacaacaatg
1441 caaatacaat caatggtgtt gttcagatat tatcttctgc agcctgttgg aatggaagtt
1501 ttcttgaaaa aaaaattgat gaacatttta aaacgagtcc caaaatccct gggattgacc
1561 tgaactcaac tagggtgtta tttgagaagt taatgaactc tcagcactcc atgattctag
1621 aacagatttt gaacagtttt gaaagttgtc tgattcccca gttgtcaagc tcaccaccag
1681 atgttgaagc catgagaatc tatttaatac tacctgagtt tcccctactc caggattcca
1741 agtattatat aacattgact attcccttgg ctatggccat tcttcggctg gatacaaacc
1801 ccagcaaagt actagataac tggtggtctc aggtatgccc gaaatatttc atgaagctgg
1861 taaacctcta taaaggtgca gtcctttatc tactgagggg aagaaagaca ttcttaattc
1921 ccgtactgtt taacaattat atcacagcag ctctcaaact cttggagaag ttatataagg
1981 taaatcttaa agtgaagcat gtggaatatg atacatttta cattcctgag atttccaatc
2041 tcgtggacat tcaggaagac tacctcatgt ggttcttgca tcaagcaggg atgaaggcta
2101 gaccatcaat aatacaggat actgtaacac tttgttccta ccctttcatc tttgatgccc
2161 aagccaagac caaaatgtta cagacagatg ctgaactaca gatgcaggtg gcagtcaatg
2221 gagccaacct gcagaatgtc ttcatgcttc tcaccctgga gcctctgctg gccagaagcc
2281 ccttcctggt ccttcacgtt cgcaggaaca accttgttgg agatgcccta agagagctga
2341 gcattcattc tgatattgat ttgaaaaagc ctctcaaagt aatctttgat ggtgaagaag
2401 cagtggatgc cggtggtgtt acaaaggaat tttttctttt gctgttaaaa gaacttttga
2461 atcccatcta tggaatgttt acctactatc aagattcaaa tctcttgtgg ttttcagaca
2521 cgtgttttgt agagcacaac tggtttcact tgattggtat aacctgtgga ctagctatct
2581 acaactccac tgtggtcgat ctccacttcc cattggctct ctacaagaag ttactcaatg
2641 taaagcctgg cttggaagac ttaaaggagt tgtcacccac tgaaggaagg agtctccaag
2701 agcttttgga ttaccccggg gaggatgtgg aggagacttt ctgcctcaac ttcacgatct
2761 gccgagaaag ctatggagtg attgaacaga agaagctgat acctggggga gataatgtaa
2821 ctgtgtgcaa ggataacagg caggaatttg tggatgctta tgtgaattat gtcttccaaa
2881 tctcagttca tgaatggtac acagccttct ctagtggctt cctaaaggtg tgtggtggca
2941 aagtacttga gctcttccag ccttcagaac tgagggctat gatggtgggg aacagcaact
3001 acaactggga agaactggaa gagactgcca tctacaaggg agattactcg gccacacatc
3061 ccactgtaaa actattttgg gaaacatttc atgagtttcc attggaaaag aagaagaagt
3121 ttctcttgtt cctgacaggc agcgatcgga ttcccatcta cggcatggcc agtctgcaga
3181 ttgtcatcca gtccacagcc agcggggagg agtacttgcc ggtggcccac acttgctaca
3241 accttcttga cctccccaag tacagcagca aagagattct gagtgcccgg ctgacccagg
3301 cccttgacaa ctatgaaggg tttagtttgg cctgaggctt ctcagcttgt ccagtatttc
3361 ccttcgttcc tcagtgtcca cattgaggcc tatacagaaa atcatgggga gtgatttcta
3421 tttttttatt gtctaagtgg gttgggactt ttaaatactg agccttgttg atgtgtttct
3481 gggattgtat agcagtaaac aacctttttg aaaaattaga ggttggggat ggggtgaaaa
3541 attggccctt gtatgggagg tgtttttgtt tttgttttaa accaaactac ccagtattcc
3601 ttgcacttgt g
//