LOCUS AK289972 1908 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75077 complete cds, highly similar to Homo
sapiens aldehyde dehydrogenase 4 family, member A1, transcript
variant P5CDhL, mRNA.
ACCESSION AK289972
VERSION AK289972.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1908)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1908
/clone="BRHIP3008643"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000422769"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 203..1894
/codon_start=1
/note="highly similar to Homo sapiens aldehyde
dehydrogenase 4 family, member A1, transcript variant
P5CDhL, mRNA"
/protein_id="BAF82661.1"
/transl_table=1
/translation="MLLPAPALRRALLSRPWTGAGLRWKHTSSLKVANEPVLAFTQGS
PERDALQKALKDLKGRMEAIPCVVGDEEVWTSDVQYQVSPFNHGHKVAKFCYADKSLL
NKAIEAALAARKEWDLKPIADRAQIFLKAADMLSGPRRAEILAKTMVGQGKTVIQAEI
DAAAELIDFFRFNAKYAVELEGQQPISVPPSTNSTVYRGLEGFVAAISPFNFTAIGGN
LAGAPALMGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSS
EHLCGINFTGSVPTFKHLWKQVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVS
GTLRSAFEYGGQKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVI
DAKSFARIKKWLEHARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFG
PVLSVYVYPDDKYKETLQLIDSTTSYGLTGAVFSQDKDVVQEATKVLRNAAGNFYIND
KSTGSIVGQQPFGGARASGTNDKPGGPHYILRWTSPQVIKETHKPLGDWSYAYMQ"
BASE COUNT 383 a 576 c 595 g 354 t
ORIGIN
1 aaatgccccc gttatggcac tagaaatatt ttttattagc cgaagctaaa tatagtggga
61 ctttggctga tcccgagctc ggaggacagc cggggtgatc cgtttccccc cgaggatcga
121 ggtggtgcgc tctggacggg gttgtgcatt ctcgccgcgc ccgggcggac gatccagcga
181 acagccccgc ttctaacccg agatgctgct gccggcgccc gcgctccgcc gcgccctgct
241 gtcccgcccc tggaccgggg ccggcctgcg gtggaagcac acctcctccc tgaaggtggc
301 caacgagccc gtcttagcct tcacgcaggg cagccctgag cgagatgccc tgcaaaaggc
361 cttgaaggac ctgaagggcc ggatggaagc catcccatgc gtggtggggg atgaggaggt
421 gtggacgtcg gacgtgcagt accaagtgtc gccttttaac catggacata aggtggccaa
481 gttctgttat gcagacaaga gcctgctcaa caaagccatt gaggctgccc tggctgcccg
541 gaaagagtgg gacctgaagc ctattgcaga ccgggcccag atcttcctga aggcggcaga
601 catgctgagt gggccgcgca gggctgagat cctcgccaag accatggtgg gacagggtaa
661 gaccgtgatc caagcggaga ttgacgctgc agcggaactc atcgacttct tccggttcaa
721 tgccaagtat gcggtggagc tggaggggca gcagcccatc agcgtgcccc cgagcaccaa
781 cagcacggtg taccggggtc tggagggctt cgtggcggcc atctcgccct ttaacttcac
841 tgcaatcggc ggcaacctgg cgggggcacc ggccctgatg ggcaacgtgg tcctatggaa
901 gcccagtgac actgccatgc tggccagcta tgctgtctac cgcatccttc gggaggctgg
961 cctgcccccc aacatcatcc agtttgtgcc agctgatggg cccctatttg gggacactgt
1021 caccagctca gagcacctct gtggcatcaa cttcacaggc agtgtgccca ccttcaaaca
1081 cctgtggaag caggtggccc agaacctgga ccggttccac accttcccac gcctggctgg
1141 agagtgcggc ggaaagaact tccacttcgt gcaccgctcg gccgacgtgg agagcgtggt
1201 gagcgggacc ctccgctcag ccttcgagta cggtggccag aagtgttccg cctgctcgcg
1261 tctctacgtg ccgcactcgc tgtggccgca gatcaaaggg cggctgctgg aggagcacag
1321 tcggatcaaa gtgggcgacc ctgcagagga ttttgggacc ttcttctctg cagtgattga
1381 tgccaagtcc tttgcccgta tcaagaagtg gctggagcac gcacgctcct cacccagcct
1441 caccatcctg gccgggggca agtgtgatga ctccgtgggc tactttgtgg agccctgcat
1501 cgtggagagc aaggaccctc aggagcccat catgaaggag gagatcttcg ggcctgtact
1561 gtctgtgtac gtctacccgg atgacaagta caaggagacg ctgcagctga ttgacagcac
1621 caccagctat ggcctcacgg gggcagtgtt ctcccaggat aaggacgtcg tgcaggaggc
1681 cacaaaggtg ctgaggaatg ctgccggcaa cttctacatc aacgacaagt ccactggctc
1741 gatagtgggc cagcaaccct ttgggggggc ccgagcctct ggaaccaatg acaagccagg
1801 gggcccacac tacatcctgc gctggacgtc gccgcaggtc atcaaggaga cacataagcc
1861 cctgggggac tggagctacg cgtacatgca gtgagcccct ctcgggct
//