LOCUS AK289966 2994 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76651 complete cds, highly similar to Homo
sapiens partner of PIX 1 (POPX1) mRNA.
ACCESSION AK289966
VERSION AK289966.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2994)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2994
/clone="BRHIP3004065"
/clone_lib="BRHIP3"
/db_xref="H-InvDB:HIT000422763"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 130..2403
/codon_start=1
/note="highly similar to Homo sapiens partner of PIX 1
(POPX1) mRNA"
/protein_id="BAF82655.1"
/transl_table=1
/translation="MAGCIPEEKTYRRFLELFLGEFRGPCGGGEPEPEPEPEPEPEPE
PESEPEPEPELVEAEAAEASVEEPGEEAATVAATEEGDQEQDPEPEEEAAVEGEEEEE
GAATAAAAPGHSAVPPPPPQLPPLPPLPRPLSERITREEVEGESLDLCLQQLYKYNCP
SFLAAALARATSDEVLQSDLSAHYIPKETDGTEGTVEIETVKLARSVFSKLHEICCSW
VKDFPLRRRPQLYYETSIHAIKNMRRKMEDKHVCIPDFNMLFNLEDQEEQAYFAVFDG
HGGVDAAIYASIHLHVNLVRQEMFPHDPAEALCRAFRVTDERFVQKAARESLRCGTTG
VVTFIRGNMLHVAWVGDSQVMLVRKGQAVELMKPHKPDREDEKQRIEALGGCVVWFGA
WRVNGSLSVSRAIGDAEHKPYICGDADSASTVLDGTEDYLILACDGFYDTVNPDEAVK
VVSDHLKENNGDSSMVAHKLVASARDAGSSDNITVIVVFLRDMNKAVNVSEESDWTEN
SFQGGQEDGGDDKENHGECKRPWPQHQCSAPADLGYDGRVDSFTDRTSLSPGSQINVL
EDPGYLDLTQIEASKPHSAQFLLPVEMFGPGAPKKANLINELMMEKKSVQSSLPEWSG
AGEFPTAFNLGSTGEQIYRMQSLSPVCSGLENEQFKSPGNRVSRLSHLRHHYSKKWHR
FRFNPKFYSFLSAQEPSHKIGTSLSSLTGSGKRNRIRSSLPWRQNSWKGYSENMRKLR
KTHDIPCPDLPWSYKIE"
BASE COUNT 801 a 717 c 785 g 691 t
ORIGIN
1 agtgctgatc gctcgtgccg gtgcggccgt taaccgccct tgccggagcc ctaggctcaa
61 aagcagcccc ttacccttcc tgggcttccc ccaacccctt tcccggtctg ccctggggca
121 tgagcagcga tggccggctg catccctgag gagaaaactt accggcgctt cctggagcta
181 ttcctgggcg agtttcgcgg accgtgcggc ggcggcgagc cggagccgga acccgaaccc
241 gaacccgaac ccgaacccga acccgagtcc gagcccgagc ccgaacctga actggtagaa
301 gctgaggcgg ccgaggcttc ggtagaggaa cccggggagg aggcggccac ggtagccgcg
361 acggaggagg gggaccagga gcaagacccg gagcccgagg aggaggcggc ggttgagggt
421 gaggaggagg aggagggcgc ggcgacggcg gcggcagccc cggggcactc ggccgtgccg
481 ccgccgccgc cccagctgcc gcctttgccc ccgctcccgc gaccgctgtc agagcgcatc
541 acccgcgagg aggtggaggg cgaaagcctg gacctgtgcc tgcagcagct ctacaaatat
601 aattgccctt cctttttggc tgctgcttta gccagagcca catcagatga agtccttcag
661 agtgatcttt ctgcacatta tatcccaaag gaaacggatg gcacagaagg gactgtggag
721 attgagacag tgaaattggc ccgttctgtc ttcagcaaac tacacgagat ttgctgcagc
781 tgggtgaaag acttccccct ccgcaggaga ccccagcttt attatgagac atcaatccat
841 gccatcaaaa acatgcgcag gaaaatggag gacaaacatg tctgcattcc tgactttaat
901 atgctcttca acctagagga ccaggaagaa caagcttact ttgcagtgtt tgatggccat
961 gggggagtag atgctgctat ttatgcctcc attcacctcc acgttaactt agtccgccag
1021 gagatgttcc cccatgatcc tgctgaggcc ctgtgcaggg ccttccgggt cactgatgag
1081 cggtttgtgc agaaagcagc cagggagagc ttaagatgtg ggaccacagg agtggtgact
1141 ttcatcagag gcaacatgct acatgtggcc tgggtgggtg attcccaggt tatgcttgtg
1201 agaaagggcc aagctgttga actaatgaag ccacacaaac cagacagaga ggatgaaaag
1261 cagagaattg aggcccttgg aggttgcgta gtctggtttg gtgcctggag ggtgaatgga
1321 agtctgtcgg tttccagagc tattggagat gctgaacata agccatatat ctgtggggat
1381 gcagattctg cctccactgt tctggatggg accgaagact acctcattct ggcctgtgat
1441 ggcttctatg acaccgtgaa ccctgatgag gcagtgaaag ttgtgtccga ccacctgaaa
1501 gagaataatg gagacagcag catggttgcc cacaaattag tggcatcagc tcgtgatgct
1561 gggtcaagtg ataacatcac ggttattgtg gtattcctga gggacatgaa caaagctgta
1621 aatgttagtg aggaatcaga ttggacagag aactcttttc aaggagggca agaagatggt
1681 ggggatgata aggagaatca tggagagtgc aaacgccctt ggcctcagca ccagtgctca
1741 gcaccagccg acctaggcta tgatgggcgt gtggattcat tcactgatag aactagcctg
1801 agcccagggt cccaaatcaa cgtgctggaa gacccaggct acttagatct cacacaaata
1861 gaagcaagca aacctcacag tgcccagttt ttgctaccag ttgagatgtt tggtcctggt
1921 gcaccaaaga aagcaaatct tattaatgag ttaatgatgg agaaaaaatc agttcagtca
1981 tcattgcctg aatggagtgg tgctggagag tttcccactg ctttcaattt gggttcaaca
2041 ggggagcaga tatacagaat gcagagcttg tctcctgtct gttcagggtt ggaaaatgaa
2101 cagttcaaat ccccgggaaa cagagtttct agattgtctc atttacgcca ccactactca
2161 aagaagtggc acagattcag gtttaatcca aagttttatt catttctctc tgctcaagag
2221 ccttcccaca aaataggcac tagcctgtcc tcacttactg gaagtgggaa gagaaatagg
2281 ataagaagtt ctctgccatg gaggcaaaat agttggaaag ggtacagtga aaacatgagg
2341 aagctcagaa agactcatga tattccatgc ccagatcttc cttggagcta taaaatagaa
2401 taatttttct ttcaagtagg ttagctagct ctcccccaat aaaaatacca ctatcagagt
2461 agaaacaagg tagacatttc taaaacatat gtgcttcatt atgaatccat ggatggctca
2521 attcttaaat gtaaatagat ctctaggaaa ctcaaagtac agtgttttca atctaaaaag
2581 aagtattggc agtttcactt gcaaaattac acagctggtc cctgtgatgt gtctcgacac
2641 caatacacaa cccccttccc accatccttc atgtcactag atacacaacc cccttcccac
2701 catcccttca gtcactagtg aaagctttca agttagttat ttcagtcagg atatacagtg
2761 ttgaaatctc aatgcagttg aaatctggtc tgatgtgcct aatttatctg tggaaaattt
2821 aatgctgaat tacatttggt tgggaaatgt ccctcaaaat cctgggcact atgaaggaac
2881 cccctgcccc ctcacctttt tgggtaggta aaagactaaa agccatatgg attttaactg
2941 ataacaatga aagtggtaaa tcagtgtaaa agtgtcatat tctcagactt gtga
//