LOCUS AK289956 1984 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ75595 complete cds, highly similar to Homo
sapiens protein kinase C and casein kinase substrate in neurons 1
(PACSIN1), mRNA.
ACCESSION AK289956
VERSION AK289956.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1984)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..1984
/clone="BRHIP2027899"
/clone_lib="BRHIP2"
/db_xref="H-InvDB:HIT000422753"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 259..1593
/codon_start=1
/note="highly similar to Homo sapiens protein kinase C
and casein kinase substrate in neurons 1 (PACSIN1), mRNA"
/protein_id="BAF82645.1"
/transl_table=1
/translation="MSSSYDEASLAPEETTDSFWEVGNYKRTVKRIDDGHRLCNDLMN
CVQERAKIEKAYGQQLTDWAKRWRQLIEKGPQYGSLERAWGAIMTEADKVSELHQEVK
NNLLNEDLEKVKNWQKDAYHKQIMGGFKETKEAEDGFRKAQKPWAKKMKELEAAKKAY
HLACKEEKLAMTREMNSKTEQSVTPEQQKKLQDKVDKCKQDVQKTQEKYEKVLEDVGK
TTPQYMENMEQVFEQCQQFEEKRLVFLKEVLLDIKRHLNLAENSSYIHVYRELEQAIR
GADAQEDLRWFRSTSGPGMPMNWPQFEEWNPDLPHTTTKKEKQPKKAEGVALTNATGA
VESTSQAGDRGSVSSYDRGQPYATEWSDDESGNPFGGSETNGGANPFEDDSKGVRVRA
LYDYDGQEQDELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEAI"
BASE COUNT 468 a 606 c 598 g 312 t
ORIGIN
1 atccttcccc cctctccgcc tcagctctga ccttcctcct tcccgcagcc ccggcgagat
61 cccagagcga cgcggtggcg gcggcagcgc cagccccctc ctcccccggg aagtcggccg
121 ggcttgaggc cgggccccag acgtcccgct tcgccccgag gcgccgccga tggtccccgg
181 agctcctgcc cccagtgcat gagcagccga gcctgctaac cgcagctccg cacttgtcca
241 tccccctgcg gctacaccat gtccagctcc tacgatgagg cctcactggc gccagaggag
301 accaccgaca gcttctggga ggtggggaac tacaagcgga ccgtgaagcg catcgatgac
361 ggccaccgtc tatgcaacga cctgatgaac tgcgtgcagg agcgcgccaa gatcgagaag
421 gcgtacgggc agcagctcac cgactgggcc aagcgttggc gccagctcat cgagaaaggc
481 ccacagtatg gcagcctgga gcgggcctgg ggtgccataa tgacagaggc agacaaggtg
541 agcgagctgc accaggaggt gaagaacaat ctgctgaatg aggacctgga gaaggtgaag
601 aactggcaga aggacgccta tcacaagcag atcatgggtg gcttcaagga gacgaaggag
661 gctgaagatg gcttccgcaa ggcccagaag ccttgggcca agaagatgaa ggagctggag
721 gcagccaaga aggcctacca tttggcttgc aaagaggaaa agctggccat gacacgggag
781 atgaacagca agacggagca atcggtcaca cctgagcagc aaaagaagct gcaggacaaa
841 gtggacaagt gcaagcagga tgtgcagaag acacaggaga agtatgagaa agtgctggaa
901 gatgtgggca agaccacacc ccagtacatg gagaacatgg agcaggtgtt tgagcaatgc
961 cagcaatttg aggaaaagcg gctggtcttc ctcaaggagg tgctgctgga catcaaacgg
1021 cacctcaacc tggctgagaa cagcagctac atccatgtgt accgtgagct ggagcaggcc
1081 atccgggggg ctgatgccca ggaagacctc agatggttcc gcagcaccag tggccccggc
1141 atgcccatga actggcccca gtttgaggag tggaacccag accttcctca caccaccacc
1201 aagaaggaga aacagcctaa gaaggcagag ggagtggcgc tgaccaatgc cactggggcg
1261 gtagagtcca catcccaggc tggggaccgc ggcagtgtta gcagctacga cagaggccag
1321 ccctacgcca ccgagtggtc agacgacgag agtgggaacc cctttggggg cagtgagacc
1381 aacgggggcg ccaacccctt tgaggacgac tccaagggag tgcgcgtgcg ggcactctac
1441 gactatgacg gccaggagca ggacgagctc agctttaagg ccggagacga actcaccaag
1501 ctgggcgagg aggatgagca gggctggtgc cgtgggcggc tggacagcgg gcagctgggc
1561 ctctaccctg ccaactacgt ggaggctatc tagaggcccc ctccctccat actcccgtca
1621 ctcctcccca ctgccgcccc tcccctccca ctctcgtctc cttcccctcg ccatagagtt
1681 ccagacatat tttccgatca agcttttatt tttttaaaag tcaaaacaga acaaaacaaa
1741 gtatgcagag acagagcatt tgcagggcca cctggaggct ggggtgctgg ggcttggggt
1801 ggccccaggg taggtaacag tcttaggact tagcccaaca tcacaacatc tgctcttcgg
1861 gttccaccaa agagtctcct gagccctgag ggatggatgt ctcctgaccc ttccaccccg
1921 cctcactccc tccgtcccac tccactccag gctgccggca cctgccccat tccctggcct
1981 ggtt
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