LOCUS AK289936 2630 bp mRNA linear HUM 09-JAN-2008
DEFINITION Homo sapiens cDNA FLJ76650 complete cds, highly similar to Human
mRNA for NF1 N-isoform-exon11.
ACCESSION AK289936
VERSION AK289936.1
KEYWORDS FLI_CDNA; oligo capping.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2630)
AUTHORS Isogai,T. and Yamamoto,J.
TITLE Direct Submission
JOURNAL Submitted (09-OCT-2007) to the DDBJ/EMBL/GenBank databases.
Contact:Takao Isogai
Reverse Proteomics Research Institute; 1-9-11 Kaji-cho,
Chiyoda-ku, Tokyo 101-0044, Japan
E-mail :flj-cdna@nifty.com
REFERENCE 2
AUTHORS Wakamatsu,A., Yamamoto,J., Kimura,K., Ishii,S., Watanabe,K.,
Sugiyama,A., Murakawa,K., Kaida,T., Tsuchiya,K., Fukuzumi,Y.,
Kumagai,A., Oishi,Y., Yamamoto,S., Ono,Y., Komori,Y., Yamazaki,M.,
Kisu,Y., Nishikawa,T., Sugano,S., Nomura,N. and Isogai,T.
TITLE NEDO human cDNA sequencing project
JOURNAL Unpublished (2007)
COMMENT Human cDNA sequencing project focused on splicing variants of mRNA
in NEDO functional analysis of protein and research application
project supported by Ministry of Economy, Trade and Industry,
Japan; cDNA selection for complete cds sequencing: Reverse
Proteomics Research Institute (REPRORI), Hitachi, Ltd., Japan
(Hitachi) and Japan Biological Informatics Consortium, Japan
(JBIC); cDNA complete cds sequencing: JBIC; cDNA library
construction: Helix Research Institute supported by Japan Key
Technology Center, Japan (HRI); cDNA 5'- & 3'-end sequencing:
Research Association for Biotechnology, Japan, Biotechnology
Center, National Institute of Technology and Evaluation, Japan and
HRI; cDNA mapping to human genome: Central Research Laboratory,
Hitachi; evaluation and annotation: REPRORI.
FEATURES Location/Qualifiers
source 1..2630
/clone="BRHIP2013085"
/clone_lib="BRHIP2"
/db_xref="H-InvDB:HIT000422733"
/db_xref="taxon:9606"
/mol_type="mRNA"
/note="cloning vector: pME18SFL3"
/organism="Homo sapiens"
/tissue_type="hippocampus"
CDS 334..2115
/codon_start=1
/note="highly similar to Human mRNA for NF1
N-isoform-exon11"
/protein_id="BAF82625.1"
/transl_table=1
/translation="MAAHRPVEWVQAVVSRFDEQLPIKTGQQNTHTKVSTEHNKECLI
NISKYKVSLVISGLATILKNVNNMRIFGEAAEKNLYLSQLIILDTLEKCLAGQPKDTM
RLDETMLVKQLLPEICHFLHTCREGNQHAAELRNSASGVLFSLSCNNFNAVFSRISTR
LQELTVCSEDNVDVHDIELLQYINVDCAKLKRLLKETAFKFKALKKVAQLAVINSLEK
AFWNWVENYPDEFTKLYQIPQTDMAECAEKLFDLVDGFAESTKRKAAVWPLQIILLIL
CPEIIQDISKDVVDENNMNKKLFLDSLRKALAGHGGSRQLTESAAIACVKLCKASTYI
NWEDNSVIFLLVQSMVVDLKNLLFNPSKPFSRGSQPADVDLMIDCLVSCFRISPHNNQ
HFKICLAQNSPSTFHYVLVNSLHRIITNSALDWWPKIDAVYCHSVELRNMFGETLHKA
VQGCGAHPAIRMAPSLTFKEKVTSLKFKEKPTDLETRSYKYLLLSMVKLIHADPKLLL
CNPRKQGPETQGSTAELITGLVQLVPQSHMPEIAQEAMEALLVLHQLDSIDLWNPDAP
VETFWEIRYMYFYFLNSTFKFYFVFLS"
BASE COUNT 761 a 579 c 524 g 766 t
ORIGIN
1 acttccggtg gggtgtcatg gcggcgtctc ggactgtgat ggctgtgggg agacggcgct
61 agtggggaga gcgaccaaga ggccccctcc cctccccggg tccccttccc ctatccccct
121 ccccccagcc tccttgccaa cgcccccttt ccctctcccc ctcccgctcg gcgctgaccc
181 cccatcccca cccccgtggg aacactggga gcctgcactc cacagaccct ctccttgcct
241 cttccctcac ctcagcctcc gctccccgcc ctcttcccgg cccagggcgc cggcccaccc
301 ttccctccgc cgccccccgg ccgcggggag gacatggccg cgcacaggcc ggtggaatgg
361 gtccaggccg tggtcagccg cttcgacgag cagcttccaa taaaaacagg acagcagaac
421 acacatacca aagtcagtac tgagcacaac aaggaatgtc taatcaatat ttccaaatac
481 aaggtttctt tggttataag cggcctcgct actattttaa agaatgttaa caatatgaga
541 atatttggag aagctgctga aaaaaattta tatctctctc agttgattat attggataca
601 ctggaaaaat gtcttgctgg gcaaccaaag gacacaatga gattagatga aacgatgctg
661 gtcaaacagt tgctgccaga aatctgccat tttcttcaca cctgtcgtga aggaaaccag
721 catgcagctg aacttcggaa ttctgcctct ggggttttat tttctctcag ctgcaacaac
781 ttcaatgcag tctttagtcg catttctacc aggttacagg aattaactgt ttgttcagaa
841 gacaatgttg atgttcatga tatagaattg ttacagtata tcaatgtgga ttgtgcaaaa
901 ttaaaacgac tcctgaagga aacagcattt aaatttaaag ccctaaagaa ggttgcgcag
961 ttagcagtta taaatagcct ggaaaaggca ttttggaact gggtagaaaa ttatccagat
1021 gaatttacaa aactgtacca gatcccacag actgatatgg ctgaatgtgc agaaaagcta
1081 tttgacttgg tggatggttt tgctgaaagc accaaacgta aagcagcagt ttggccacta
1141 caaatcattc tccttatctt gtgtccagaa ataatccagg atatatccaa agacgtggtt
1201 gatgaaaaca acatgaataa gaagttattt ctggacagtc tacgaaaagc tcttgctggc
1261 catggaggaa gtaggcagct gacagaaagt gctgcaattg cctgtgtcaa actgtgtaaa
1321 gcaagtactt acatcaattg ggaagataac tctgtcattt tcctacttgt tcagtccatg
1381 gtggttgatc ttaagaacct gctttttaat ccaagtaagc cattctcaag aggcagtcag
1441 cctgcagatg tggatctaat gattgactgc cttgtttctt gctttcgtat aagccctcac
1501 aacaaccaac actttaagat ctgcctggct cagaattcac cttctacatt tcactatgtg
1561 ctggtaaatt cactccatcg aatcatcacc aattccgcat tggattggtg gcctaagatt
1621 gatgctgtgt attgtcactc ggttgaactt cgaaatatgt ttggtgaaac acttcataaa
1681 gcagtgcaag gttgtggagc acacccagca atacgaatgg caccgagtct tacatttaaa
1741 gaaaaagtaa caagccttaa atttaaagaa aaacctacag acctggagac aagaagctat
1801 aagtatcttc tcttgtccat ggtgaaacta attcatgcag atccaaagct cttgctttgt
1861 aatccaagaa aacaggggcc cgaaacccaa ggcagtacag cagaattaat tacagggctc
1921 gtccaactgg tccctcagtc acacatgcca gagattgctc aggaagcaat ggaggctctg
1981 ctggttcttc atcagttaga tagcattgat ttgtggaatc ctgatgctcc tgtagaaaca
2041 ttttgggaga ttaggtatat gtacttttat tttttaaatt caacttttaa attttatttt
2101 gtatttttgt cttgaaatat taactctgta gtacttagta cattgtaaaa cttacacttc
2161 caaaggtttt atggttttgt attttatttg acttcaaatt attagaattt cttgttttaa
2221 ctgtaagaaa agtatcacag caatttagaa aataaatttt aagaatagtg ctaaattttg
2281 tcaccctaac ataagtactg ttgtttggta tattactttt ttcagatttc aatgtggtta
2341 ctactgtatt tttaatagat tttcatagtt ataagcctag aatgataaaa ttttgtaaca
2401 atactgtttt ttcagttttt tgaactatga tctttcataa actttctgta ataccaatgc
2461 tttcgatgaa tgaattaata atggacacct gcttagaaga aaaaaatgta tgcagaattt
2521 tgtggtctgc ttcctagatt atacaaatca ttacatttta atgagcatga agtcaccaca
2581 cggaggaaaa tgtaaatgtg taaacctcaa gtttgccatt atcttataag
//